DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and src-2

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_493502.1 Gene:src-2 / 173296 WormBaseID:WBGene00005078 Length:507 Species:Caenorhabditis elegans


Alignment Length:543 Identity:150/543 - (27%)
Similarity:241/543 - (44%) Gaps:110/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 IPRSNMKPKAASPATPPTPVSPHSHHQHPHVPALTITKKKQKENSSSMFNTLRLTSPKKALFDMN 481
            |.:.:..|.|.||....:.:...|...||.:|::                     .|..|....|
 Worm     5 IGKEDPPPGATSPVHTSSTLGRESLPSHPRIPSI---------------------GPIAASSSGN 48

  Fly   482 SLRKNKSKGKRSDSESSVSGSL----AGTEQELQAAAPMLKSLSFSTE----FSTFNADGVTGSG 538
            ::.||     ::.|:|:...:|    |.|:.:|......:..:...|:    |:...|.|.||  
 Worm    49 TIDKN-----QNISQSANFVALFQYDARTDDDLSFKKDDILEILNDTQGDWWFARHKATGRTG-- 106

  Fly   539 AAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERA--------GQWIGNGYQP 595
                    .:|.|....|       :..|::..||.|.. .|:.|:.        |.::....:.
 Worm   107 --------YIPSNYVARE-------KSIESQPWYFGKMR-RIDAEKCLLHTLNEHGAFLVRDSES 155

  Fly   596 TMDVLSLL---DQQIKAPAVARLNSLG-------PNASTESEMASY----------LHRKC--SG 638
            ....|||.   :..:|...:.:|:..|       |.|:....:|.|          |...|  |.
 Worm   156 RQHDLSLSVRENDSVKHYRIRQLDHGGYFIARRRPFATLHDLIAHYQREADGLCVNLGAPCAKSE 220

  Fly   639 TPSTPSAT-----EVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSG-WLLRKSGAGEESRLEVAI 697
            .|.|.:.|     ||:...:|         |.|:||.|:||.|..| |         ...:.||:
 Worm   221 APQTTTFTYDDQWEVDRRSVR---------LIRQIGAGQFGEVWEGRW---------NVNVPVAV 267

  Fly   698 KMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGI-AKGEMLMMVQELAPLGSMLQYILDHGHEIT 761
            |.|....::..:||.||.:|.:|.|..::.|..: .:.|.:::|.||.. .::|.::...|.:..
 Worm   268 KKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQ-ENLLTFLQRRGRQCQ 331

  Fly   762 ANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQG 826
            ....::: ::|:|.||.|||..:|:||||||||||:......||:|||::|.|.. ..||:...|
 Worm   332 MPQLVEI-SAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMK-ENEYEARTG 394

  Fly   827 GRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNL 891
            .|:||:|.|||:.|...|:..|||||||:.:.|:.:.|..||..::|.:.::.||:|.|:|.|..
 Worm   395 ARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVLQQVDAGYRMPCPAG 459

  Fly   892 CPAYIYAVMQSCWKERPKDRPTF 914
            ||..:|.:||.||:..|..||||
 Worm   460 CPVTLYDIMQQCWRSDPDKRPTF 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 94/251 (37%)
src-2NP_493502.1 SH3_Src_like 61..112 CDD:212779 11/60 (18%)
SH2_Src_Src42 120..215 CDD:198233 18/95 (19%)
PTKc_Frk_like 231..496 CDD:270653 98/273 (36%)
Blue background indicates that the domain is not in the aligned region.

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