DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and Matk

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_006513357.1 Gene:Matk / 17179 MGIID:99259 Length:506 Species:Mus musculus


Alignment Length:291 Identity:107/291 - (36%)
Similarity:164/291 - (56%) Gaps:20/291 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   634 RKCSGTPSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIK 698
            |:..|..|    .|.|.||..:.::.:.|.|..:||.||||:|..|..|.:         :||:|
Mouse   210 RRKQGAKS----AEEELAKAGWLLDLQHLTLGAQIGEGEFGAVLQGEYLGQ---------KVAVK 261

  Fly   699 MLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITAN 763
            .:..: ...|.||.|.:||.:|:|:.:|||:|:.....|.:|.|....|:::.::...|..:.:.
Mouse   262 NIKCD-VTAQAFLDETAVMTKLQHRNLVRLLGVILHHGLYIVMEHVSKGNLVNFLRTRGRALVST 325

  Fly   764 AELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGR 828
            ::|..:|..:|.||.||||:..|||||||||||::....||:||||::::.|.|      ....|
Mouse   326 SQLLQFALHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAERKG------LDSSR 384

  Fly   829 WPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCP 893
            .|::|.|||:...|.||..||||||||.:||:||.|..||.::|..:..:.|:.|.|:..|:.||
Mouse   385 LPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRAPYPKMSLKEVSEAVEKGYRMEPPDGCP 449

  Fly   894 AYIYAVMQSCWKERPKDRPTFVYLTEFFARD 924
            ..::.:|.|||:..|..||.|..:.|...|:
Mouse   450 GSVHTLMGSCWEAEPARRPPFRKIVEKLGRE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560
ANK 117..241 CDD:238125
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
Ank_2 158..247 CDD:289560
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
Ank_4 224..274 CDD:290365
SH2_Cterm_shark_like 287..395 CDD:198211
TyrKc 662..921 CDD:197581 99/258 (38%)
PTKc_Syk_like 666..926 CDD:270650 98/259 (38%)
MatkXP_006513357.1 SH3 49..107 CDD:388381
SH2_csk_like 117..214 CDD:198190 1/3 (33%)
PKc_like 227..480 CDD:389743 99/268 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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