DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and src-1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:560 Identity:151/560 - (26%)
Similarity:233/560 - (41%) Gaps:121/560 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 KKQKENSSSMFNTLRL----------TSPKKALFDMN--------SLRKNKSKGKRSDSESSVSG 501
            |:::...|.|..:.|:          |..::.:|.:|        |.....|.|...:......|
 Worm     7 KERRSGGSDMGVSERIDVSRYPRRFQTPQQQTVFHVNNGGNEGTISQLNGTSDGMMGNGRGGGGG 71

  Fly   502 SLAGTEQELQAAAPMLK----SLSFSTEFSTF-----NAD---------GVTGSGAAAAGEVYNV 548
            ..|...:.|.|..|...    .|||....:.:     |.|         |.||          .|
 Worm    72 GGAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTG----------YV 126

  Fly   549 PRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAGQWIGNGYQP----------------TM 597
            |||....:       |..|:|..|..|    |.|.||.:.:.:.:.|                .:
 Worm   127 PRNFVAKQ-------QTIESEEWYAGK----IPRNRAERLVLSSHLPKGTFLIREREADTREFAL 180

  Fly   598 DVLSLLDQQ----IKAPAVARL-NSLGPNASTE------SEMASYLHRKCSG------------T 639
            .:....||:    :|...:.|| :..|...:|.      .|:..|......|            .
 Worm   181 TIRDTDDQRNGGTVKHYKIKRLDHDQGYFITTRRTFRSLQELVRYYSDVPDGLCCQLTFPAPRLA 245

  Fly   640 PSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSG-WLLRKSGAGEESRLEVAIKMLSDE 703
            |:.|..:  ...:..:.|...:|.|.|::|.|.||.|..| |         ...:|||||.:...
 Worm   246 PTRPDLS--HDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKW---------RGIVEVAIKTMKPG 299

  Fly   704 HSNKQEFLREASVMMRLEHKCIVRLIGI-AKGEMLMMVQELAPLGSMLQYILDHGHEITANAELK 767
            ..:.:.||:||.:|.:.:|..:|:|..: .:.|...::.|....||:|||:...|..:...| |.
 Worm   300 TMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGSTLGIQA-LV 363

  Fly   768 VWASQIACGMHYLESQHFVHRDLAARNIL----LTARHQAKISDFGMSRSLRPGSTEYQFTQGGR 828
            ..|:|||.||.|||.:..|||||||||:|    ::.....|::|||::|.|..... |:...|.:
 Worm   364 DMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI-YEARTGAK 427

  Fly   829 WPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCP 893
            :||:|.|||:...|.|:..|||||:|:.::|:.:.|..||..:.|.:.::.|:.|.|:|.|..||
 Worm   428 FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCP 492

  Fly   894 AYIY-AVMQSCWKERPKDRPTFVYLTEFF-----ARDPDY 927
            ..|| .|:..||.:.|..||||..|..||     :..|:|
 Worm   493 EQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNY 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
SH2_Cterm_shark_like 287..395 CDD:198211
PTKc_Syk_like 666..926 CDD:270650 97/271 (36%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779 14/60 (23%)
SH2_Src_family 138..240 CDD:199827 19/105 (18%)
PTKc_Src_like 270..522 CDD:270630 96/262 (37%)
Blue background indicates that the domain is not in the aligned region.

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