DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and cindr

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_061502128.1 Gene:cindr / 1274051 VectorBaseID:AGAMI1_004916 Length:946 Species:Anopheles gambiae


Alignment Length:865 Identity:156/865 - (18%)
Similarity:268/865 - (30%) Gaps:271/865 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 PASFIRTLISAQANVQGRNIDNGYVPLHEAAKHGNLEAVQELLLAEAPPLPRTSSGEFPFDLAKE 263
            |::|:..:.|..             |...:.|.||:.....:...:...||.| :|.....|:|.
Mosquito   133 PSNFVEMIESVS-------------PKSSSRKSGNVGGGTGVTAIDGGGLPAT-TGSLGASLSKT 183

  Fly   264 AGQTAVEEFLLNYKLPPANTTRDQWYHGTLTREEAVAILKKHAKE----LLAKQPEVDTSGCFLV 324
            ..        ||......|::|:.     |.|.:|.::..|..:|    |.|.||         .
Mosquito   184 NS--------LNKSRTSLNSSRED-----LDRHDAPSLPPKPVRELCKVLFAYQP---------A 226

  Fly   325 RYSESPAASGLVLTLLCDQVV-----KNFRISQADLYQNGNKVQ----SGGSKFLYIDDGPYWPS 380
            ...|.....|.::|:|..::.     |.....:..::.: |.|.    .||....:|.     .|
Mosquito   227 NEDELKLVEGDIITILSKELPDKGWWKGELRGRIGVFPD-NFVSLLPPEGGKSSAHIS-----AS 285

  Fly   381 VEHLIAHFMRFSYGLPVSLKYP--VPPQ------PKPEVPSFAT----IPRSNMKPKAASPAT-- 431
            |..|.:....:|.| .||..:|  |.|.      |||:.|..|:    ..:....|...|.|.  
Mosquito   286 VRSLASSTTGYSSG-GVSPHHPGVVSPVKDPLHIPKPDRPPTASKMQMFGKQTSNPSTTSAAAYR 349

  Fly   432 ----------------------------PPTPVSPHSHHQ------------HPHVPALTITKK- 455
                                        .||..|..:|.:            .|...|..:|:| 
Mosquito   350 KESFGSKDSLNESTGSVGSVGGAGSVTGSPTYNSVAAHRKSLESKGTDGSAVSPAPTAGIVTEKP 414

  Fly   456 --KQKEN-SSSMFNTLRLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSL-AGTEQELQAAAPM 516
              |..|| :|.:..:|.....|||.......:|.:...|:|.|.:||:|:| :|.:|:::....:
Mosquito   415 PRKSLENKASEIRKSLENLDDKKATPPPVLGKKPQVPIKKSPSITSVTGNLFSGLKQKVKGGGSL 479

  Fly   517 LKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIE 581
            .|..:.:.:    ..||: ||......||.:                           ..|.:|.
Mosquito   480 EKDKTTAGD----ERDGI-GSSKVVKSEVAD---------------------------NGDRSIM 512

  Fly   582 RERAGQWIGNGYQPTMDVLSLLDQQIKAP------AVARLNSLGPNASTESEMASYLHRKCSGTP 640
            .||....:|:..:.|..:..:...:.|||      :.:.:.:..||.:..           .|:.
Mosquito   513 GERIDVELGHVERGTSVLKDMRANRAKAPKRRPPSSPSSIITTDPNVTAN-----------GGSV 566

  Fly   641 STPSATEVEAAKLRFFIEPEKLVLDREI--------GHGEFGSVHSG------------------ 679
            |..:.......:|....|||....|..:        .||...:..:|                  
Mosquito   567 SLSNGNSGLFNQLSLSFEPESPKPDLMVSAAPALNSSHGSGSTATTGDAEEAVPKVAKPREWEKN 631

  Fly   680 ---WL-------LRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKG 734
               |:       .:|:.|.|....|....:.|.:||.......|.|:.............|.|  
Mosquito   632 KVPWMDELKASQAKKTTASESKSPEHHHHVSSSQHSTSSHTQEETSISKSFHASTTTTTTGGA-- 694

  Fly   735 EMLMMVQELAPLGSMLQYILDHGHEITAN-AELKVWASQIACGMHYLESQHFVHRDL---AARNI 795
                  ....|:.|        ||.:.|. .|.....:.:..     ||.|..:...   ::.::
Mosquito   695 ------GTTPPVPS--------GHAVRARLMERSATTTSVPS-----ESNHASNSTSNINSSFDL 740

  Fly   796 LLTARHQAKISDFGMSRSLRPGSTEYQ-----FTQGGRWPIRWYAPESFNLGIFSHASDVWSFGV 855
            :.:...:..::...:|.| ..||.::|     |             ||.|:...:.:....|   
Mosquito   741 IASCNRKDTVTPSSVSSS-GGGSLQHQQHHQSF-------------ESSNVSAMTKSMSALS--- 788

  Fly   856 TIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYL-TE 919
            |.....::.|...|.:|:..|:...:.....|.||                   .||..|.| :.
Mosquito   789 TTTTKIAISASSTGTVSSTTAVTENNGTHEPPSPN-------------------SRPVSVNLRST 834

  Fly   920 FFARDPDYQNLPELVQTVHI 939
            ..:..|..:|    .:|:||
Mosquito   835 SISPTPQNRN----AKTIHI 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430 26/121 (21%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
ANK repeat 186..217 CDD:293786 3/17 (18%)
ANK repeat 220..245 CDD:293786 4/24 (17%)
SH2_Cterm_shark_like 287..395 CDD:198211 23/120 (19%)
PTKc_Syk_like 666..926 CDD:270650 46/305 (15%)
cindrXP_061502128.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.