DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and Bmx

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_033889.2 Gene:Bmx / 12169 MGIID:1101778 Length:655 Species:Mus musculus


Alignment Length:789 Identity:190/789 - (24%)
Similarity:309/789 - (39%) Gaps:192/789 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 EDILKHLLNAKVQVNSSDSFGCQPLHYAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEAAKH 231
            :.||:.||..|.|.....|    |.:|    |...|:.|..|...        ..|..:...::.
Mouse     8 KSILEELLLKKSQQKKKMS----PNNY----KERLFVLTKTSLSY--------YEYDKMKRGSRK 56

  Fly   232 GNLE-----AVQELLLAEAPPLPRTSSGEFPFDLAKEAGQTAVEEFLLNYKLPPANTTRDQWYHG 291
            |::|     .|:::.|.|..|:.|    ::||.:..:.|        |.|.......:|.||   
Mouse    57 GSIEIKKIRCVEKVNLEEQTPVER----QYPFQIVYKDG--------LLYVYASNEESRCQW--- 106

  Fly   292 TLTREEAVAILKKHAKELLAKQPEVDTSGCFLVRYSESPAASGLVLTLLCDQVVK-----NFRIS 351
                             |.|.|.|:..:...|::|.......|..  |.|.|..|     ....:
Mouse   107 -----------------LKALQKEIRGNPHLLIKYHSGFFVDGKF--LCCQQSCKAAPGCTLWEA 152

  Fly   352 QADLYQNGNKVQSGGSKFLYIDD----GPYWPSVEHLIAHFMRFSYGLPVSLKYP--VPPQPKPE 410
            .|||:             :.|.|    .|.:|  |.|              ||.|  ||......
Mouse   153 YADLH-------------IAISDEKHRAPTFP--ERL--------------LKIPRAVPVLKMDA 188

  Fly   411 VPSFATIPRSNMKPKAASPATPPTPVSPHSHHQHPHVPALTITKKKQKENSSSMFNTLRLTSPKK 475
            ..|.|.:|:.:...|.:..:.|.:.:.        ::|         :|:....:...:|.| ::
Mouse   189 SSSGAILPQYDSYSKKSCGSQPTSNIR--------YIP---------REDCPDWWQVRKLKS-EE 235

  Fly   476 ALFDMNSLRKNKSKGKRSDSESSVS-----GSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVT 535
            .:...|.|.:|.:    |.|.|.:|     .|.:..|:.|.|......::|.|.........|..
Mouse   236 DIACSNQLERNIA----SHSTSKMSWGFPESSSSEEEENLHAYDWFAGNISRSQSEQLLRQKGKE 296

  Fly   536 GSGAAAAGEVYNVPRNNTPIEIDLPPIAQK---------------TEAEVEYFTKSDVAIERERA 585
            |:         .:.||::.:.:....:..|               |.||.:.:...:...:    
Mouse   297 GA---------FMVRNSSQMGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFD---- 348

  Fly   586 GQWIGNGYQPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGTPSTPSATEVEA 650
                      ::..|....|...|..:.||                  |....|.:......|..
Mouse   349 ----------SIPKLIHYHQHNSAGMITRL------------------RHPVSTKANKVPVSVAL 385

  Fly   651 AKLRFFIEPEKLVLDREIGHGEFGSVHSG-WLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREA 714
            ....:.::.|::.|.:|:|:|:||.|..| |         :.:.:||:||:.:...::.||.:||
Mouse   386 GSGIWELKREEITLLKELGNGQFGVVQLGQW---------KGQYDVAVKMIKEGAMSEDEFFQEA 441

  Fly   715 SVMMRLEHKCIVRLIGI-AKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMH 778
            ..||:|.|..:|:..|: :|...:.:|.|....|.:|.|:..||..: .:.:|......:..||.
Mouse   442 QTMMKLSHPKLVKFYGVCSKKYPIYIVTEYITNGCLLNYLKSHGKGL-ESCQLLEMCYDVCEGMA 505

  Fly   779 YLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGI 843
            :|||..|:||||||||.|:.:....|:|||||:|.:.  ..:|..:.|.::|::|.|||.|:...
Mouse   506 FLESHQFIHRDLAARNCLVDSDLSVKVSDFGMTRYVL--DDQYVSSVGTKFPVKWSAPEVFHYFK 568

  Fly   844 FSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERP 908
            :|..||||:||:.:||:||||..||....|.:.:..|..|.||.:|.|....||.:|.|||.|.|
Mouse   569 YSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVSQGHRLYRPQLASDTIYQIMYSCWHELP 633

  Fly   909 KDRPTFVYL 917
            :.||||..|
Mouse   634 EKRPTFQQL 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560 6/16 (38%)
ANK 117..241 CDD:238125 17/78 (22%)
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786 6/16 (38%)
Ank_2 158..247 CDD:289560 19/84 (23%)
ANK repeat 186..217 CDD:293786 6/30 (20%)
ANK repeat 220..245 CDD:293786 5/29 (17%)
Ank_4 224..274 CDD:290365 10/54 (19%)
SH2_Cterm_shark_like 287..395 CDD:198211 22/116 (19%)
TyrKc 662..921 CDD:197581 97/258 (38%)
PTKc_Syk_like 666..926 CDD:270650 96/254 (38%)
BmxNP_033889.2 PH_Btk 25..151 CDD:269944 34/175 (19%)
PH 27..115 CDD:278594 26/131 (20%)
SH2_Tec_Bmx 269..374 CDD:198262 18/145 (12%)
PKc_like 392..647 CDD:304357 98/263 (37%)
Pkinase_Tyr 397..646 CDD:285015 97/258 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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