DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and hck

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_005174178.1 Gene:hck / 101885596 ZFINID:ZDB-GENE-090313-72 Length:499 Species:Danio rerio


Alignment Length:494 Identity:139/494 - (28%)
Similarity:231/494 - (46%) Gaps:91/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 ALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVTGSGAA 540
            ||:|..::.:.....|:.|           ..:.||.:....|::..||                
Zfish    59 ALYDYEAMHEGDLGFKKGD-----------RLRILQESGEWWKAVIIST---------------- 96

  Fly   541 AAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERER--------AGQWIGNGYQPTM 597
              |:...:|.|.         :|:.|....|:|.|.....:.||        .|.::....:.|.
Zfish    97 --GQEGFIPSNY---------VAKDTLETEEWFFKGVSRKDAERQLLASGNKTGSFMIRDSETTK 150

  Fly   598 DVLSL----LDQQ---IKAPAVARLNS----LGPNA--STESEMASYLHRKCSG----------T 639
            ...||    .|.|   :|...:..|::    :.|..  :|..::.|:..::..|          :
Zfish   151 GSYSLSVRDSDHQADTVKHYKIRTLDNGGFYISPRITFNTLQDLVSHYKKQSDGLCQSLTSPCLS 215

  Fly   640 PSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEH 704
            |......|.:|    :.|..|.|.||:.:|.|:||.|   |:     |......:||:|.:....
Zfish   216 PKPQKPWEKDA----WEIPRESLKLDKRLGAGQFGEV---WM-----AMYNKHTKVAVKTMKPGS 268

  Fly   705 SNKQEFLREASVMMRLEHKCIVRLIG-IAKGEMLMMVQELAPLGSMLQYI-LDHGHEITANAELK 767
            .:.:.||.||::|..|:|..:|||.. :.|.|.:.::.|....||:|.:| .|.|:.:.. .:|.
Zfish   269 MSVEAFLMEANLMKSLQHDKLVRLNAVVTKEEPIYIITEFMEKGSLLDFIKSDEGNRVQL-PKLI 332

  Fly   768 VWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIR 832
            .:::|||.||.|:|.::::||||.|.|||:......||:|||::|.:.  ..||...:|.::||:
Zfish   333 DFSAQIAEGMAYIEQRNYIHRDLRAANILVNKSLVCKIADFGLARIIE--DNEYTAREGAKFPIK 395

  Fly   833 WYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIY 897
            |.|||:.|.|.|:..|||||||:.:.|:.|.|..||..::|.:.|:.::.|.|:.:.:.||..:|
Zfish   396 WTAPEAINYGSFTIKSDVWSFGILLTEIISYGRTPYPGMTNPEVIRALERGYRMQRLDSCPQELY 460

  Fly   898 AVMQSCWKERPKDRPTFVY----LTEFF-ARDPDYQNLP 931
            .:|..|||.:|:|||||.|    |.:|: |.:..||..|
Zfish   461 DIMLECWKNKPEDRPTFEYLQSVLEDFYTATESQYQQQP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560
ANK 117..241 CDD:238125
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
Ank_2 158..247 CDD:289560
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
Ank_4 224..274 CDD:290365
SH2_Cterm_shark_like 287..395 CDD:198211
TyrKc 662..921 CDD:197581 97/264 (37%)
PTKc_Syk_like 666..926 CDD:270650 96/266 (36%)
hckXP_005174178.1 SH3 58..109 CDD:302595 13/87 (15%)
SH2 113..215 CDD:301589 17/101 (17%)
PTKc_Hck 222..487 CDD:270658 101/279 (36%)
Pkinase_Tyr 234..484 CDD:285015 96/260 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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