DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shark and Tyk2

DIOPT Version :9

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001244276.1 Gene:Tyk2 / 100361294 RGDID:2320469 Length:1186 Species:Rattus norvegicus


Alignment Length:292 Identity:104/292 - (35%)
Similarity:156/292 - (53%) Gaps:42/292 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 REIGHGEFGSVHSGWLL--RKSGAGEESRLEVAIKMLSD--EHSNKQEFLREASVMMRLEHKCIV 726
            |::|.|.||.| |.:..  ...|.||    .||:|.|.:  ....:..:.||..::..|.|:.||
  Rat   900 RDLGEGHFGKV-SLYCYDPNNDGTGE----MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 959

  Fly   727 RLIGIA--KGE-MLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHR 788
            :..|..  :|| .:.:|.|..||||:..|:..|.   ...|:|.::|.||..||.||.:||::||
  Rat   960 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHS---VGLAQLLLFAQQICEGMAYLHAQHYIHR 1021

  Fly   789 DLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSF 853
            ||||||:||......||.|||:::::..|...|:..:.|..|:.|||||......|.:|||||||
  Rat  1022 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 1086

  Fly   854 GVTIWEMF----SLGAPP----------YGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCW 904
            |||::|:.    |..:||          .|:::.:...:|::.|||||:|:.||..||.:|::||
  Rat  1087 GVTLYELLTYCDSSQSPPTKFIELIGVTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCW 1151

  Fly   905 KERPKDRPTFVYLTEFFARDPDYQNLPELVQT 936
            :.....||||             |||..:::|
  Rat  1152 ESEASFRPTF-------------QNLVPILKT 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
Ank_2 <112..184 CDD:289560
ANK 117..241 CDD:238125
ANK repeat 124..151 CDD:293786
ANK repeat 153..184 CDD:293786
Ank_2 158..247 CDD:289560
ANK repeat 186..217 CDD:293786
ANK repeat 220..245 CDD:293786
Ank_4 224..274 CDD:290365
SH2_Cterm_shark_like 287..395 CDD:198211
TyrKc 662..921 CDD:197581 100/275 (36%)
PTKc_Syk_like 666..926 CDD:270650 100/280 (36%)
Tyk2NP_001244276.1 FERM_F1 33..130 CDD:408179
FERM_F2 148..271 CDD:408177
Jak1_Phl 290..433 CDD:407742
SH2 438..536 CDD:417686
PKc_like 591..866 CDD:419665
PTKc_Tyk2_rpt2 891..1173 CDD:270664 104/292 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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