DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shark and sh3kbp1

DIOPT Version :10

Sequence 1:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster
Sequence 2:XP_002935234.3 Gene:sh3kbp1 / 100151706 XenbaseID:XB-GENE-492559 Length:655 Species:Xenopus tropicalis


Alignment Length:665 Identity:122/665 - (18%)
Similarity:213/665 - (32%) Gaps:239/665 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WYHG-----------NLSREAADELLK-----------QGYEDGTFLVRESSTAAGDFVLSLLCQ 52
            |:.|           |..||...:..|           ||..:|..|:  ||.|    |:....:
 Frog    36 WWEGELKGRRGLFPDNFVRELKKDTKKEQNSKPPDRPTQGISNGNALL--SSEA----VIRSAGR 94

  Fly    53 GEVCHYQVRRHGGEDAFFSI---DDKVQTKILHGLDTLVD----YYQQAANGLPTKLTVPLIRDL 110
            ||    :.||...:.||..:   :|:::.|:...::.|.:    :::...||.........||::
 Frog    95 GE----RTRRRRCQVAFSYLPQNEDELELKVGEIIEVLGEVEEGWWEGVLNGKTGMFPSNFIREI 155

  Fly   111 PPHNTRSHGVTNLLHRATSKNESKVVFELLKCGYRNFDAKNQDGQTALHLAALHSDEDI--LKHL 173
                             .::.|.....:.:|..:::......||          .|..:  ....
 Frog   156 -----------------VTETEIGNFEQQIKTAFKDTTGSESDG----------GDSKLEGTNGT 193

  Fly   174 LNAKVQVNSSDSFGCQPLHYAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEAAKHGNLEAVQ 238
            ...:.|......||...:.   :.||.......|..::.:         ||:.:|.         
 Frog   194 SGGETQSKRIRGFGFGDIF---KDKPIKLRPRSIEMESEI---------VPIEKAM--------- 237

  Fly   239 ELLLAEAPPLPRTSSGEFPFDLAKEAGQTAVEEF---LLNYKLPPAN--TTRD------------ 286
                  ...:|.|.:.:.|..:..|: :|...|:   |..|:....:  |.||            
 Frog   238 ------GKKMPPTVTSQEPMKIETES-KTKPREYCKVLFPYEAMNEDELTIRDGDIVTVLSKECV 295

  Fly   287 --QWYHGTLTREEAVAILKKHAKELLAKQPEVDTSGCFLVRYSESPAASGLVLTLLCDQVVKNFR 349
              .|:.|.|..::.|  ...:..:||....|.:     |.|..:.|..|.        .|.|:..
 Frog   296 DAGWWEGELNGKKGV--FPDNFVKLLPSDFEKE-----LHRPKKPPPPSA--------PVTKSGT 345

  Fly   350 ISQADLYQNGNKVQSGGSKFLYIDDGPYWPSV------EHLIAHFMRFSYGLPVSLKYPVP--PQ 406
            ...::..|:..|:.....     |..|..|..      :|.::.          |||:.||  |.
 Frog   346 SGTSERKQDIRKIPPERP-----DTLPQRPDEKERSDRDHKVSD----------SLKHSVPAIPP 395

  Fly   407 PKPEVPSFATIPRSNMKPKAASPATPPTPVSP--HSHHQHP--HVPALTITKKKQKENSSSM--- 464
            .||..|...::.|    |....|..|..||.|  |...:.|  .|...|::...:::.|...   
 Frog   396 KKPRPPKTNSLSR----PGTLPPRRPERPVGPVTHGRSESPKSEVGINTVSSTPERDPSDKSNDI 456

  Fly   465 ----FNTL-----RLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTE-----------QE 509
                |:::     :|:.|        :..:.||.|:|..|:|..|.||:..:           .|
 Frog   457 DVEGFDSVVTVGEKLSHP--------TASRPKSSGRRPPSQSLTSSSLSSPDFFDSPSPEEEKDE 513

  Fly   510 LQA---------------AAP----------------MLKSLSFSTEFSTFNADGVTGSGAA--- 540
            |.|               |||                ::.::|||        .|.:|:.:|   
 Frog   514 LTALAQRAIEASKKTARSAAPSQMPDNRTVLPPKPGGLISNVSFS--------HGASGAPSAFHT 570

  Fly   541 -AAGEVYNVPRNNTP 554
             |||.    .|:|:|
 Frog   571 VAAGS----HRSNSP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210 23/109 (21%)
ANKYR <94..317 CDD:440430 36/243 (15%)
ANK repeat 124..151 CDD:293786 2/26 (8%)
ANK repeat 153..184 CDD:293786 4/32 (13%)
ANK repeat 186..217 CDD:293786 5/30 (17%)
ANK repeat 220..245 CDD:293786 3/24 (13%)
SH2_Cterm_shark_like 287..395 CDD:198211 19/113 (17%)
PTKc_Syk_like 666..926 CDD:270650
sh3kbp1XP_002935234.3 SH3_CIN85_1 3..55 CDD:212985 3/18 (17%)
SH3_CIN85_2 103..154 CDD:212988 8/50 (16%)
SH3_CIN85_3 264..319 CDD:212990 9/56 (16%)
PHA03247 <356..595 CDD:223021 56/265 (21%)
CCDC22 <568..>652 CDD:461708 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.