DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL12 and mrpl12

DIOPT Version :10

Sequence 1:NP_524742.1 Gene:mRpL12 / 44326 FlyBaseID:FBgn0011787 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001006886.1 Gene:mrpl12 / 448724 XenbaseID:XB-GENE-1005183 Length:189 Species:Xenopus tropicalis


Alignment Length:187 Identity:75/187 - (40%)
Similarity:109/187 - (58%) Gaps:8/187 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITRLALRQISRQVQLHRMYSAAAPAAAVSGAEK---LVPPAPEGAAKPPNPKLDSIVNNIAALNL 64
            :||..||..:....|.|...:.......:...|   |..|:.:.|.|...||:.::|:.||:|.|
 Frog     4 VTRCCLRLQAVSSALRRFEISTVRLLRTTSELKNQALPSPSLDNAPKEYPPKIHNLVDQIASLTL 68

  Fly    65 LEVAELSTLLKQKLNLPETAFAP--QFAAGPARAAPAEDEEEA-AP-KKVQTSFKVKLVKFDEKQ 125
            |||:|.:.||::.|.:.:....|  ...:| |.|||::..||| || ||.:|.|.|||.:.:...
 Frog    69 LEVSEFNELLRKTLKIQDVGMMPMGSMLSG-ATAAPSQAAEEAEAPGKKEKTHFTVKLTEVNATD 132

  Fly   126 KVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDIPKEEAEKLKEALSKAGAIIEIE 182
            ||.|||||||.::|:|||||||.||:.|..:|.::.|:||||:|.||..||..:.:|
 Frog   133 KVKLIKEVKNCIQGLNLVQAKKLVEALPQEIKANVSKDEAEKIKAALEAAGGKVALE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL12NP_524742.1 RplL 51..182 CDD:439992 62/134 (46%)
mrpl12NP_001006886.1 Ribosomal_L7_L12 54..188 CDD:100102 63/134 (47%)

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