DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL12 and Mrpl12

DIOPT Version :10

Sequence 1:NP_524742.1 Gene:mRpL12 / 44326 FlyBaseID:FBgn0011787 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001025071.1 Gene:Mrpl12 / 303746 RGDID:1588559 Length:276 Species:Rattus norvegicus


Alignment Length:191 Identity:76/191 - (39%)
Similarity:105/191 - (54%) Gaps:25/191 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RLALRQ-----ISRQVQ--LHRMYSAAAPAAAVSGAEKLVPPAPEGAAKPPNPKLDSIVNNIAAL 62
            ||..:|     ::||::  .||. |.|...|.:..|.|..|           ||:..:|.:||:|
  Rat    98 RLVRQQMPGVCVARQLRSSSHRR-SEALAGAPLDNAPKEYP-----------PKIQQLVQDIASL 150

  Fly    63 NLLEVAELSTLLKQKLNLPETAFAPQF----AAGPARA-APAEDEEEAAPK-KVQTSFKVKLVKF 121
            .|||:::|:.|||:.|.:.:....|..    .|.||.| ||...|||..|| |.||.|.|:|.:.
  Rat   151 TLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAVPAAAPAPEAAEEEDLPKQKEQTHFTVRLTEA 215

  Fly   122 DEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDIPKEEAEKLKEALSKAGAIIEIE 182
            ....||.||||:||.::|:|||||||.|||.|..:|.::.|.||||:|.||...|..:.:|
  Rat   216 KPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL12NP_524742.1 RplL 51..182 CDD:439992 61/136 (45%)
Mrpl12NP_001025071.1 RplL 139..276 CDD:439992 61/136 (45%)

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