DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CanB and AT5G17470

DIOPT Version :9

Sequence 1:	NP_001245531.1	Gene:	CanB / 44317	FlyBaseID:	FBgn0010014	Length:	170	Species:	Drosophila melanogaster
Sequence 2:	NP_197249.1	Gene:	AT5G17470 / 831613	AraportID:	AT5G17470	Length:	146	Species:	Arabidopsis thaliana

Alignment Length:	139	Identity:	42/139 - (30%)
Similarity:	65/139 - (46%)	Gaps:	23/139 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 FRKLDLDNSGALSIDEFMSLPELQQNPLVQRVID-IF---DADGNGEVDFKEFIQGVSQFSVRGD 87
            |.::|.:..|.:|.|||..........:....|| :|   |.||:.::|..|:...: .....|:
plant     7 FERVDKNKDGKISWDEFAEAIRAFSPSITSEEIDNMFREIDVDGDNQIDVAEYASCL-MLGGEGN 70

  Fly    88 KLSK---LRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFA-----DKDE 144
            |..:   ::.||.:||:|.||.||..|:..|||.:       .:.|.|.:   |.|     |.|.
plant    71 KEDEDIVMKEAFDLYDIDGDGKISASEIHVVLKRL-------GEKQTIAE---CIAMVRAVDADG 125

  Fly   145 DGKISFDEF 153
            ||.:||:||
plant   126 DGFVSFEEF 134

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CanB	NP_001245531.1	FRQ1	13..154	CDD:227455	42/139 (30%)
AT5G17470	NP_197249.1	EF-hand_7	5..60	CDD:290234	15/52 (29%)
		EFh	5..58	CDD:238008	14/50 (28%)
		EF-hand_7	78..138	CDD:290234	25/67 (37%)
		EFh	79..139	CDD:238008	25/66 (38%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1271942at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010