DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanB and Kcnip4

DIOPT Version :10

Sequence 1:NP_524741.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_030110777.1 Gene:Kcnip4 / 80334 MGIID:1933131 Length:256 Species:Mus musculus


Alignment Length:171 Identity:48/171 - (28%)
Similarity:83/171 - (48%) Gaps:26/171 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSIDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            |.|...|::.|.:.|:     |   ||.::.:.|..:     |:.........:.:.||.|.||.
Mouse    80 SKFTKKELQILYRGFK-----NECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGA 139

  Fly    70 VDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGN----NLKDT 127
            |.|::||:|:| ..:||....||.:||.:||::.||||:..|:..::|.   |:|.    .||:.
Mouse   140 VSFEDFIKGLS-ILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED 203

  Fly   128 QLQQIVDK--TICFADKDEDGKISFDEFCSVVG-NTDIHKK 165
            ..:|.|:.  .:...:...:|.:..|  |.:.| :||..:|
Mouse   204 APRQHVETFFQVGMNNASREGWLEVD--CLMPGKHTDEKQK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_524741.1 FRQ1 20..157 CDD:444056 41/153 (27%)
Kcnip4XP_030110777.1 EF-hand_8 99..146 CDD:404678 11/46 (24%)
EFh 124..186 CDD:238008 24/62 (39%)

Return to query results.
Submit another query.