DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB and cib2

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001072810.1 Gene:cib2 / 780271 XenbaseID:XB-GENE-985356 Length:187 Species:Xenopus tropicalis


Alignment Length:173 Identity:51/173 - (29%)
Similarity:87/173 - (50%) Gaps:16/173 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNETSLPMDM-------CSNFDADEIRRLGKRFRKL-------DL--DNSGALSIDEFMSLPEL 49
            |||:.::..|.       |:.|...||.||..||.:|       |.  |....|.:...:::|||
 Frog     1 MGNKQTIFTDEQLDAYQDCTFFTRKEILRLHGRFYELAPNIVPMDYTDDPDVKLPMQLIINMPEL 65

  Fly    50 QQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQ 114
            .:||..:|::..|..||.|.:.|.:|:...|..|....:..|..:||:|||.:.|.:|...:|.:
 Frog    66 VENPFKERIVQSFSEDGEGNLSFNDFVDMFSVMSEMAPRELKAIYAFKIYDFNTDNFICKSDLEK 130

  Fly   115 VLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157
            .|..:....|::.::..:.:|.|..||.|.|||::|.:|.:::
 Frog   131 TLNKLTREELEEEEVNLVCEKVIEEADMDGDGKLAFADFENMI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 45/149 (30%)
cib2NP_001072810.1 FRQ1 20..178 CDD:227455 46/154 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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