DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB and VSNL1

DIOPT Version :10

Sequence 1:NP_524741.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001353733.1 Gene:VSNL1 / 7447 HGNCID:12722 Length:208 Species:Homo sapiens


Alignment Length:114 Identity:38/114 - (33%)
Similarity:62/114 - (54%) Gaps:8/114 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDNSGALSIDEFMSL-----PELQQNPLVQRVIDIFDADGNGEVDF 72
            :.|:..|:::..|.|.| |.. ||.|:::||..|     |....:...|.....||.:|:|.:||
Human    20 TEFNEHELKQWYKGFLK-DCP-SGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDF 82

  Fly    73 KEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVG 121
            :|||..:| .:.||....||.:||.:||:|.||.|:..|:.::::...|
Human    83 REFICALS-ITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEIIEHSAG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_524741.1 FRQ1 20..157 CDD:444056 36/107 (34%)
VSNL1NP_001353733.1 EFh 36..90 CDD:238008 19/55 (35%)
EFh 65..125 CDD:238008 24/60 (40%)

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