DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanB and Kcnip1

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_017170240.1 Gene:Kcnip1 / 70357 MGIID:1917607 Length:249 Species:Mus musculus


Alignment Length:160 Identity:45/160 - (28%)
Similarity:77/160 - (48%) Gaps:25/160 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSIDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            :||...|::.|.:.|:     |   ||.::.:.|..:     |....:.....:.:.||....|.
Mouse    75 TNFTKRELQVLYRGFK-----NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 134

  Fly    70 VDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISN----GELFQVLKM---MVGNN---- 123
            |.|::|:..:| ..:||....|||:.|.:||::.||||:.    .|:..::|.   |:|..    
Mouse   135 VKFEDFVTALS-ILLRGTVHEKLRWTFNLYDINKDGYINKEVPFQEMMDIVKAIYDMMGKYTYPV 198

  Fly   124 LKDTQLQQIVDKTICFADKDEDGKISFDEF 153
            ||:...:|.||......||::||.::.|||
Mouse   199 LKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 45/160 (28%)
Kcnip1XP_017170240.1 FRQ1 68..238 CDD:227455 45/160 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.