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Protein Alignment CanB and Cib3
DIOPT Version :9
Sequence 1: | NP_001245531.1 |
Gene: | CanB / 44317 |
FlyBaseID: | FBgn0010014 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178010.1 |
Gene: | Cib3 / 685723 |
RGDID: | 1590245 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 173 |
Identity: | 49/173 - (28%) |
Similarity: | 85/173 - (49%) |
Gaps: | 16/173 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGNETSL-------PMDMCSNFDADEIRRLGKRFR-------KLDLDNSGALSI--DEFMSLPEL 49
|||:.:: ....|:.|...||.||..|:: .||...|..:.: :...|:|||
Rat 1 MGNKQTVFSHEQLEEYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTSPEVKVPYELIGSMPEL 65
Fly 50 QQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQ 114
:.||..||:..:|..||:|.:..:.|:...|..|....:..|..:||:|||.:||.||...:|.|
Rat 66 KDNPFRQRIAQVFSQDGDGHMTLENFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDNYICTWDLEQ 130
Fly 115 VLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157
.:..:....|...::..:.:|.:..||.|.||::|.::|.:::
Rat 131 TVTRLTRGELSVEEVTLVCEKVLDEADSDHDGRLSLEDFQNMI 173
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB | NP_001245531.1 |
FRQ1 |
13..154 |
CDD:227455 |
44/149 (30%) |
Cib3 | NP_001178010.1 |
FRQ1 |
6..178 |
CDD:227455 |
46/168 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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