DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanB and cib3

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001011260.1 Gene:cib3 / 496710 XenbaseID:XB-GENE-5787572 Length:207 Species:Xenopus tropicalis


Alignment Length:169 Identity:57/169 - (33%)
Similarity:86/169 - (50%) Gaps:16/169 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNE----TSLPMDM---CSNFDADEIRRLGKRFRKL-------DLDNSGALSI--DEFMSLPEL 49
            |||:    |:..:|.   |:.|...||.||..|:|.|       |..|...:.|  :...|:|||
 Frog     1 MGNKQTIFTAEQLDTYQDCTFFTRKEILRLFNRYRDLAPQLVPDDYTNKPDVKIPYELIGSMPEL 65

  Fly    50 QQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQ 114
            :.||..||:.::|..||:|.:...:|:...|..|....|..|..:||:|||.:||.||...:|.:
 Frog    66 KDNPFRQRIAEVFSEDGDGNMTLDDFLDMFSVLSEMAPKDLKAFYAFKIYDFNNDDYICKSDLEK 130

  Fly   115 VLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEF 153
            .|..:..|.|...::..:.:|.|..||.|.|||:|.::|
 Frog   131 TLNKLTRNELTPEEVCLVCEKVIDEADVDNDGKLSLEDF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 51/150 (34%)
cib3NP_001011260.1 FRQ1 20..178 CDD:227455 51/150 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.