DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB and kcnip1b

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_021334841.1 Gene:kcnip1b / 494089 ZFINID:ZDB-GENE-041212-57 Length:225 Species:Danio rerio


Alignment Length:156 Identity:42/156 - (26%)
Similarity:76/156 - (48%) Gaps:21/156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSIDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            :||...|::.|.:.|:     |   ||.::.|.|..:     |....:.....:...||...||.
Zfish    55 TNFSKQELQVLYRGFK-----NECPSGVVNEDTFKHIYAQFFPHGDASTYAHYLFHAFDTRNNGS 114

  Fly    70 VDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGN----NLKDT 127
            :.|::|:.|:|.. :||....||.:.|.:||::.||:|:..|:.::::.   |:|.    .||..
Zfish   115 IKFEDFVMGLSTL-LRGTVRDKLEWTFHLYDINKDGFINKEEMTEIVRAIYDMMGKYTYPALKGD 178

  Fly   128 QLQQIVDKTICFADKDEDGKISFDEF 153
            ..:..||......||::||.::.:||
Zfish   179 VPKAHVDAFFEKMDKNKDGVVTLEEF 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 42/156 (27%)
kcnip1bXP_021334841.1 FRQ1 48..205 CDD:227455 42/156 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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