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Protein Alignment CanB and rcvrn.2
DIOPT Version :9
Sequence 1: | NP_001245531.1 |
Gene: | CanB / 44317 |
FlyBaseID: | FBgn0010014 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008164.1 |
Gene: | rcvrn.2 / 493526 |
XenbaseID: | XB-GENE-5807318 |
Length: | 193 |
Species: | Xenopus tropicalis |
Alignment Length: | 192 |
Identity: | 50/192 - (26%) |
Similarity: | 89/192 - (46%) |
Gaps: | 26/192 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGNETSLPM------DMCSN--FDADEIRRLGKRFRKLDLDNSGALSIDEFMSL-----PELQQN 52
|||..|..: |:.:| :..||:.:..:.|.| ...:|.::..||..: |.....
Frog 1 MGNTKSGALSKEVLEDLKANTRYSDDELCKWYESFSK--QSPNGKITRTEFEKIYANFFPNSDPK 63
Fly 53 PLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVL- 116
...:.|...||.:.:|.:||:|:|..: ..:..|....||.:||.::|:|.:|.||..|:.:::
Frog 64 SYARHVFRSFDTNEDGTLDFREYIIAL-HLTSSGKTSLKLEWAFSLFDVDKNGEISKVEVLEIIT 127
Fly 117 ---KMM---VGNNLKDTQ--LQQIVDKTICFADKDEDGKISFDEFC-SVVGNTDIHKKMVVD 169
||: ...||.|.: .|:..||...:..|.:|.||:..||. .::.|.:|.:.:..|
Frog 128 AIFKMIPPEEQKNLADDENTPQKRADKLWAYFKKSDDAKIAEGEFIQGIMMNDEIMRLIQYD 189
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB | NP_001245531.1 |
FRQ1 |
13..154 |
CDD:227455 |
41/156 (26%) |
rcvrn.2 | NP_001008164.1 |
FRQ1 |
14..177 |
CDD:227455 |
43/165 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.930 |
|
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