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Protein Alignment CanB and chp1
DIOPT Version :9
Sequence 1: | NP_001245531.1 |
Gene: | CanB / 44317 |
FlyBaseID: | FBgn0010014 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001004859.1 |
Gene: | chp1 / 448152 |
XenbaseID: | XB-GENE-1007598 |
Length: | 193 |
Species: | Xenopus tropicalis |
Alignment Length: | 169 |
Identity: | 69/169 - (40%) |
Similarity: | 97/169 - (57%) |
Gaps: | 13/169 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SNFDADEIRRLGKRFRKLDLDNSGALSIDEFMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQ 77
:.|...:|.||..||..||...:|.||.::|..:|||..|||..|:|:.|..:|..:|:|:.|::
Frog 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFTEGEDQVNFRGFMR 85
Fly 78 GVSQFSVRGD-------------KLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQL 129
.::.|....| :.:||.||||:||:|.|..||..||.|||:||||.|:.|.||
Frog 86 TLAHFRPIEDNSKDANSQEPLNSRSNKLLFAFRLYDLDKDDKISREELLQVLRMMVGVNISDDQL 150
Fly 130 QQIVDKTICFADKDEDGKISFDEFCSVVGNTDIHKKMVV 168
..|.|:||..||:|.|..|||.||..|:...|:.:||.:
Frog 151 GSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMSI 189
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB | NP_001245531.1 |
FRQ1 |
13..154 |
CDD:227455 |
64/153 (42%) |
chp1 | NP_001004859.1 |
FRQ1 |
1..180 |
CDD:227455 |
66/158 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000640 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.930 |
|
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