DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanB and KCNIP1

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001265268.1 Gene:KCNIP1 / 30820 HGNCID:15521 Length:241 Species:Homo sapiens


Alignment Length:181 Identity:50/181 - (27%)
Similarity:83/181 - (45%) Gaps:46/181 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSIDEFM----------SLPELQQNPLVQ-------- 56
            :||...|::.|.:.|:     |   ||.::.|.|.          :||.|:.:|.|:        
Human    46 TNFTKRELQVLYRGFK-----NECPSGVVNEDTFKQIYAQFFPHGALPCLEGSPCVEFLPPSPAL 105

  Fly    57 ------------RVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISN 109
                        .:.:.||....|.|.|::|:..:| ..:||....|||:.|.:||::.||||:.
Human   106 LFCLVDASTYAHYLFNAFDTTQTGSVKFEDFVTALS-ILLRGTVHEKLRWTFNLYDINKDGYINK 169

  Fly   110 GELFQVLKM---MVGNN----LKDTQLQQIVDKTICFADKDEDGKISFDEF 153
            .|:..::|.   |:|..    ||:...:|.||......||::||.::.|||
Human   170 EEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 50/181 (28%)
KCNIP1NP_001265268.1 FRQ1 39..230 CDD:227455 50/181 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.