DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB and guca1b

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_571946.1 Gene:guca1b / 140431 ZFINID:ZDB-GENE-011128-6 Length:197 Species:Danio rerio


Alignment Length:159 Identity:43/159 - (27%)
Similarity:81/159 - (50%) Gaps:24/159 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DADE----IRRLGKRFRKLDLD-NSGALSIDEFMSLPELQQNP----LVQRVIDIFDADGNGEVD 71
            |:||    :..|.:.::|..:: .||.|.:.:|.|...:.:||    .::.:...||.:|:..:|
Zfish     8 DSDEKEIDVAELQEWYKKFVIECPSGTLFMHDFKSFFGVTENPEAADYIENMFRAFDKNGDNTID 72

  Fly    72 FKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLK-------DTQL 129
            |.|::..:: ..:||....||::.|::||.|..|.|...||.::::.:.  .||       |.:.
Zfish    73 FLEYVAALN-LVLRGKLEHKLKWTFKMYDKDGSGCIDKTELKEIVESIY--RLKKACHGELDAEC 134

  Fly   130 -----QQIVDKTICFADKDEDGKISFDEF 153
                 .|:||:.....|::.||::|.|||
Zfish   135 NLLTPDQVVDRIFELVDENGDGELSLDEF 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 43/159 (27%)
guca1bNP_571946.1 FRQ1 1..171 CDD:227455 43/159 (27%)
EFh <29..77 CDD:298682 13/47 (28%)
EFh 55..116 CDD:238008 18/61 (30%)
EFh 91..168 CDD:238008 23/75 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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