DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanB and kcnip1

DIOPT Version :9

Sequence 1:NP_001245531.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_002937770.1 Gene:kcnip1 / 100497014 XenbaseID:XB-GENE-973728 Length:230 Species:Xenopus tropicalis


Alignment Length:156 Identity:45/156 - (28%)
Similarity:79/156 - (50%) Gaps:21/156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNFDADEIRRLGKRFRKLDLDN---SGALSIDEFMSL-----PELQQNPLVQRVIDIFDADGNGE 69
            :||:..|::.|.:.|:     |   ||.::.|.|..:     |....:.....:.:.|||..:|.
 Frog    60 TNFNKRELQVLYRGFK-----NECPSGVVNEDTFKLIYSQFFPHGDASMYAHYLFNAFDAAQSGS 119

  Fly    70 VDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKM---MVGNN----LKDT 127
            |.|::|:..:|.. :||....|||:.|.:||::.||.|:..|:..::|.   |:|..    ||:.
 Frog   120 VKFEDFVAALSVL-LRGSIHEKLRWTFNLYDINKDGNINKEEMMDIVKAIYDMMGKYTYPVLKED 183

  Fly   128 QLQQIVDKTICFADKDEDGKISFDEF 153
            ..:|.|:......||::||.::.|||
 Frog   184 APKQHVEVFFQKMDKNKDGVVTLDEF 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanBNP_001245531.1 FRQ1 13..154 CDD:227455 45/156 (29%)
kcnip1XP_002937770.1 FRQ1 53..219 CDD:227455 45/156 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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