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Protein Alignment CanB and rcvrn.1
DIOPT Version :9
Sequence 1: | NP_001245531.1 |
Gene: | CanB / 44317 |
FlyBaseID: | FBgn0010014 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002937040.1 |
Gene: | rcvrn.1 / 100302393 |
XenbaseID: | XB-GENE-973335 |
Length: | 202 |
Species: | Xenopus tropicalis |
Alignment Length: | 191 |
Identity: | 47/191 - (24%) |
Similarity: | 85/191 - (44%) |
Gaps: | 38/191 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGNETSLPMDMCSNFDADEIRRLGKRFRKLDLDN----------SGALSIDEFMSL-----PELQ 50
|||..|..: |....:|: :|..:|.:.:|.. :|.:|..:|..: |:..
Frog 1 MGNSKSSAL---SKEILEEL-QLNTKFSQEELCTWYQSFLKECPTGRISKQQFEGIYSKFFPDAD 61
Fly 51 QNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQV 115
.....:.|...||::.:|.:||||::..:...| .|....||.:||.:||:|.:|.|:..|:.::
Frog 62 PKAYARHVFRSFDSNNDGTLDFKEYMIALHMTS-SGKANQKLEWAFSLYDVDGNGTINKSEVLEI 125
Fly 116 L----KMM---------VGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFC-SVVGNTDI 162
: ||: ...|..:.:..:|.| .|..||.| |::..||. .::.|.:|
Frog 126 ITAIFKMINTEDQKHLPEDENTPERRTNKIWD---FFGKKDND-KLTEGEFIQGIMNNKEI 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CanB | NP_001245531.1 |
FRQ1 |
13..154 |
CDD:227455 |
40/168 (24%) |
rcvrn.1 | XP_002937040.1 |
FRQ1 |
14..182 |
CDD:227455 |
41/173 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271942at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.930 |
|
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