DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and Phf6

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_081918.1 Gene:Phf6 / 70998 MGIID:1918248 Length:364 Species:Mus musculus


Alignment Length:318 Identity:69/318 - (21%)
Similarity:118/318 - (37%) Gaps:88/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KELQCLICKYSDTDDLVFGEWMIVRNLQV--HYFCLLLSTHLPQRGGDSSGILGFLLRDIREEAA 67
            ::.:|..||  ...|...|:.:|..|.:|  |:.|:|.|:.|.....|:..:.||.:.|:::|..
Mouse    13 RQRKCGFCK--SNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIK 75

  Fly    68 AAEKRKCWYCNKIGASLQCD--RCRSLFHLKCGLENRAVFEFCGQYKSYCYKCRPMDDYKRQLQS 130
            ...|..|..|:..||::.||  .|...:|..|.|.::|                       |::.
Mouse    76 RGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKA-----------------------QIRE 117

  Fly   131 NPPRNATCPICFSSIYKVELHCVVYGDCCRLGFAHKKCMR--QYALTSGYYLRCIWCRSERFRDS 193
            .|.:         .||      :||   ||   .|||...  :..|...:....:...|.:.:..
Mouse   118 KPSQ---------GIY------MVY---CR---KHKKTAHNSEADLEESFNEHELEPSSPKTKKK 161

  Fly   194 IR--------LQSVFVPDRD----ATWEKQRNAYREL--HERNLKCDQPNC-LCPSGRTYNRLSW 243
            .|        |:.:....|.    .|.|.:.::||:.  |..:....:|.| .|..|...|....
Mouse   162 SRKGRPRKTNLKGLPEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEENEARG 226

  Fly   244 VILCCSSCAATSAHLKCLV---GALRL--PKKRERTDF---------------KCSMC 281
            .:...::..| :||.||::   |.::|  ..:.|..||               ||::|
Mouse   227 KLHIFNAKKA-AAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLC 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 30/111 (27%)
PHD_SF 224..>260 CDD:304600 8/36 (22%)
PARM 318..>491 CDD:293666
Phf6NP_081918.1 Nuclear localization signal. /evidence=ECO:0000255 13..16 0/2 (0%)
Extended PHD1 domain (ePHD1). /evidence=ECO:0000255|PROSITE-ProRule:PRU01146 14..132 38/163 (23%)
ePHD1_PHF6 17..131 CDD:277180 38/159 (24%)
Nuclear localization signal. /evidence=ECO:0000255 129..133 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..211 10/71 (14%)
Nucleolar localization signal. /evidence=ECO:0000255 157..169 1/11 (9%)
Extended PHD2 domain (ePHD2). /evidence=ECO:0000255|PROSITE-ProRule:PRU01146 209..330 18/76 (24%)
ePHD2_PHF6 212..329 CDD:277181 17/73 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..364
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12420
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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