DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and kmt2ca

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_005162602.1 Gene:kmt2ca / 560793 ZFINID:ZDB-GENE-080520-3 Length:4958 Species:Danio rerio


Alignment Length:551 Identity:117/551 - (21%)
Similarity:182/551 - (33%) Gaps:161/551 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 CWYCNKIGASLQC--DRCRSLFHLKCGLENRAVFEFCGQYKSYCYKCRPMDDYKRQLQSNPPRNA 136
            |.||.::|||::|  :.|...||..|... ...|:   ..|:|...|   .||.:|.........
Zfish   301 CAYCKRLGASIKCCEESCGRSFHYPCAAA-AGTFQ---DIKTYTLLC---PDYIQQALVRSKDGV 358

  Fly   137 TCPICFSS------IY------------------------------KVELHCVVYGD------C- 158
            .|.:|.||      ::                              ||.|.|...||      | 
Zfish   359 KCLVCDSSGDLLDQLFCCTCGQHYHGTCLDVTVTPLKRAGWQCPECKVCLSCKNPGDDSKMLVCD 423

  Fly   159 -CRLGFAHKKCMR---QYALTSGYYLRCIWCRSERFRDSIRLQSVFVPDRDATWEKQR---NAYR 216
             |..|: |..|::   :...|:|:  ||..||:       ..|....|  :..|....   ...:
Zfish   424 MCDKGY-HTFCLQPIMETIPTNGW--RCKNCRT-------CAQCGMRP--NGQWSSNGVMCEGCQ 476

  Fly   217 ELHERNLKCDQPNCLCPSGRTYNRLSWVILCCSSCAATSAHLKCLVGALRLPKKRERTDFKCSMC 281
            :.||..|.|    .:|...:.....:....|| :|... .|:.|:......|..:.:..:.|..|
Zfish   477 QQHESALLC----LICGQSQDSGSPADKHTCC-TCKRW-VHVDCVRQEGTNPDTQLQDGYTCRAC 535

  Fly   282 LDVERRI------------------AEGPARTTEET-NADG-----------------DNQVDGS 310
            ..||...                  ||....:.||. .|:|                 ||.:..:
Zfish   536 KQVEEETRHSQPVSSQEASLTDPEPAEDVFMSVEEVQEAEGEVVLEPEPSASPLATLPDNFLSST 600

  Fly   311 FYVQKL--------GPDAATRSLTQTPVFS--------EEDESERSSNITVI----FSQPKSNAT 355
            ...|::        |||....|.|...|.|        .||..:.||.|..:    .|:.|...|
Zfish   601 EPAQEIQVTVTLTEGPDPPPCSSTAVGVSSFSFQASTTTEDHIQESSLIGALEMGKESEDKLPET 665

  Fly   356 SERLSLSPPQEEMIVEIPDSP--EASPKTSIDENHSPQPIARRD---TSDSPQPIAASEIPDSPQ 415
            :|    ..|:..:...:|..|  |.||..::.:...|..:...|   ..|.....||.|.|:..|
Zfish   666 TE----EEPEPNVSKALPALPTKETSPMHTLAQEEEPMDVYSSDPYSMKDKRMTEAAVEDPEQKQ 726

  Fly   416 PTAASEIPD------LPQTTAINVNPELTQQTALNTIPHSPQPEASFSTQLVSQTFDCPQPQEQA 474
            .....|:||      :|:..::.:.||.:....::|.|.|.:..:|||:           |.|..
Zfish   727 EHEKPEVPDPEVTSIIPEPESVPLIPESSPTMEMDTTPVSERSFSSFSS-----------PVEDK 780

  Fly   475 VAKAPNSPSLPKEDPNTLLVLKSGFQCPGEP 505
            .....:||.|..|  .::.:.:|.|.....|
Zfish   781 CLVLKHSPGLSSE--GSIKLTQSPFSTEASP 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 14/44 (32%)
PHD_SF 224..>260 CDD:304600 6/35 (17%)
PARM 318..>491 CDD:293666 47/195 (24%)
kmt2caXP_005162602.1 PHD_SF 263..346 CDD:304600 15/51 (29%)
PHD1_KMT2C_like 360..404 CDD:276984 4/43 (9%)
PHD2_KMT2C 406..451 CDD:277069 14/47 (30%)
PHD_SF 484..535 CDD:304600 9/56 (16%)
PHD4_KMT2C 973..1029 CDD:277071
PHD5_KMT2C_like 1030..1076 CDD:276988
PHD_SF 1108..1157 CDD:304600
HMG 1707..1760 CDD:197700
CITED 2586..>2683 CDD:282356
ePHD2_KMT2C 4440..4544 CDD:277167
FYRN 4599..4649 CDD:283589
FYRC 4656..4736 CDD:283590
SET 4819..4940 CDD:214614
SET <4820..4958 CDD:225491
PostSET 4942..4958 CDD:214703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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