DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and Kmt2c

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_038964891.1 Gene:Kmt2c / 502710 RGDID:1587205 Length:5003 Species:Rattus norvegicus


Alignment Length:576 Identity:123/576 - (21%)
Similarity:198/576 - (34%) Gaps:189/576 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LLRDIREEAAAAEKRKCWYCNKIGASLQC--DRCRSLFHLKCGL--------------------- 99
            ||.::.:...:....:|.:|..:||:::|  ::|..::|..|..                     
  Rat   269 LLVNVDKAVVSGSTERCAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTFQDFSHFFLLCPEHIDQ 333

  Fly   100 --------ENRAVFE------------FCGQ-YKSYCYKCRPMDDYKRQLQSNPPRNA--TCPIC 141
                    .|.||.:            .||| |...|.          .:...|.|.|  .||.|
  Rat   334 APERSKEDANCAVCDSPGDLLDQFFCTTCGQHYHGMCL----------DIAVTPLRRAGWQCPEC 388

  Fly   142 FSSIYKVELHCVVYG--------DCCRLGFAHKKCMR---QYALTSGYYLR----CIWCRSERFR 191
                 ||..:|...|        |.|..|: |..|::   :...|:|:..:    ||.|.:   |
  Rat   389 -----KVCQNCRQSGEDSKMLVCDTCDKGY-HTFCLQPVMKSVPTNGWKCKNCRICIECGT---R 444

  Fly   192 DSIRLQSVFVPDRDATWEKQRNAYRELHERNLKCD----QPNCLCP-SGRTYN-RLSWVILCCSS 250
            .|            |.|          |...|.||    |.:.||| .|:.|: .|...:|.|:.
  Rat   445 SS------------AQW----------HHNCLICDTCNQQQDNLCPFCGKCYHPELQKDMLHCNM 487

  Fly   251 CAATSAHLKCLVGALRLPKKRE-----RTDFKCSMCLDVERRIAE-GPARTTE-----ETNADGD 304
            |... .||:|     ..|..:|     :.::.|..|..:...|.. .|....|     .|:....
  Rat   488 CKRW-VHLEC-----DKPTDQELDSQLKEEYICMYCKHLGAEIDPLHPGNEVEMPELLPTDDSSG 546

  Fly   305 NQVDGS-----FYVQKLGPDAATRSLTQTP---------VFSEE----DESERSSNITVIFSQPK 351
            .:::|:     |..|.:..|.:..   |:|         |::||    |..|....:.:|.|:..
  Rat   547 MEIEGTEDEVVFLEQTVNEDVSGH---QSPPGIVPDAVQVYTEEPQKSDPLESPDTVGLITSESS 608

  Fly   352 SNATSERLS------LSPPQEEMIVE---IPDSPEASPKTSIDENHSPQPIARRDTSDSPQPIAA 407
            .|.|:..|:      :...:.||..:   :.:..::..:..:.||....|.......:...|...
  Rat   609 ENKTNPDLANEISHEVDTEKTEMFYKEGLVCEEDQSEDRMEVTENIEVLPHQTIVPQEELLPSEG 673

  Fly   408 SEI-PDSPQPTAASEIPDLPQTTAINVNPELTQQTALNTIPHSPQPEASFSTQ--LVSQTFDCPQ 469
            ||: |:.|.|:.::              .||....|| ..|||   |:|.|.:  ||.:     :
  Rat   674 SEVAPEEPSPSESA--------------VELAAPEAL-VSPHS---ESSLSHKGPLVIE-----R 715

  Fly   470 PQEQAVAKAPNS--PSLPKEDPNTLLV--LKSGFQCPGEPFFYLVIYE---FEHGT 518
            .||:...| .||  |:..::...||.|  ...|..|.|:....|...|   |..||
  Rat   716 VQEEMEQK-ENSEFPTGCEDFEMTLAVDGCVKGSSCQGDKSAELPAEEESPFSSGT 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 18/102 (18%)
PHD_SF 224..>260 CDD:304600 14/41 (34%)
PARM 318..>491 CDD:293666 42/199 (21%)
Kmt2cXP_038964891.1 ePHD1_KMT2C 247..330 CDD:277166 10/60 (17%)
PHD1_KMT2C_like 343..388 CDD:276984 13/54 (24%)
PHD2_KMT2C 390..435 CDD:277069 10/45 (22%)
PHD3_KMT2C 466..517 CDD:276986 15/56 (27%)
PHD_SF 948..1004 CDD:419867
PHD5_KMT2C_like 1005..1051 CDD:276988
RanBP2-type Zn finger 1080..1102 CDD:275375
PHD6_KMT2C 1082..1132 CDD:277073
HMG 1659..1712 CDD:197700
PHA03247 <1901..2381 CDD:223021
Atrophin-1 <2439..>2692 CDD:397323
MDN1 <2694..2955 CDD:227596
Myosin_tail_1 <3202..>3284 CDD:396244
PHA03247 <3314..3677 CDD:223021
ePHD2_KMT2C 4494..4598 CDD:277167
FYRN 4643..4694 CDD:399155
FYRC 4700..4784 CDD:399156
SET_KMT2C_2D 4850..5002 CDD:380948
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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