DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and arel1

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001011393.1 Gene:arel1 / 496863 XenbaseID:XB-GENE-5852856 Length:806 Species:Xenopus tropicalis


Alignment Length:423 Identity:78/423 - (18%)
Similarity:131/423 - (30%) Gaps:118/423 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 VILCCSSCAATSAHLK-----CLVGALR---LPKKRERTDFKCSMCLDVERRIAEGPARTTEETN 300
            |.:|..|......||.     |....||   ||  ....:|:..:..|.|:.|.           
 Frog   228 VSVCSGSQNRVLLHLALLQTGCFQATLRFQGLP--INNGNFQIIVLTDGEKTIV----------- 279

  Fly   301 ADGDNQVD----GSFYVQKLGPDAATRSLT---QTPVFSEEDESERSSNITVIFSQPKS---NAT 355
               ||.|.    |.|:...|.|.:::.::.   ::...|.::||....:......:||.   ..|
 Frog   280 ---DNNVSRSGVGVFFEGYLYPPSSSPNIPGQHRSSSTSNDEESNADGHTVDRLKKPKKVYFYIT 341

  Fly   356 SERLSLSP----------------PQEEMIVEIPDSPEASPKTSIDENHSPQPI----------A 394
            .::||:..                |..:.:...||.........:|:...| ||          |
 Frog   342 PKQLSVKEFYLRIIPWRLFTFRVCPGTKFLYLPPDPLHGLLSLQVDDGLQP-PIEISCKDRNIMA 405

  Fly   395 RRDTSDSPQPIAASEIPDSPQPTAASEIPDLP-QTTAINVNPELTQQTALNTIPHSPQPEASFST 458
            ...|......|..||...........|:..:. :.|...|..::.:.:.|.:   |.:...:||.
 Frog   406 ATFTRFLHLNIGGSETFQDKVTFFQKELRQIHCKKTRCKVTLKVNRHSLLES---SLRATRNFSA 467

  Fly   459 QLVSQTFDCPQPQEQAVAKAPNSPSLPKE-----------DPNTLLVLK-----SGFQCPG---E 504
            ....:.|:.....|:|:....     |:.           |.|..|.::     .|...|.   .
 Frog   468 SDWCKNFEVVFQDEEALDWGG-----PRREWFELICKTLFDTNNQLFIRFSDSNQGLVHPNPCRP 527

  Fly   505 PFFYLVIYEFEHGTCMGECI------GTCV-----------------LR-----FKEDDPRIQDT 541
            |...:.:|||. |..:|:|:      |.|.                 ||     |:.|||....|
 Frog   528 PNIRVKLYEFA-GRVVGKCLFESSLGGGCEQLVRARFTRSFLAQIIGLRMHYKYFETDDPDFFQT 591

  Fly   542 SQAALERVNITPDDVWCRSEDRGIFEHIEKFHE 574
            ....:...::...::....|..|....:||..|
 Frog   592 KVQYILTNDVIDTELSFAEEKYGRAGQLEKVVE 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600
PHD_SF 224..>260 CDD:304600 5/20 (25%)
PARM 318..>491 CDD:293666 33/216 (15%)
arel1NP_001011393.1 Filamin 56..153 CDD:366210
HECTc 447..804 CDD:238033 34/187 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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