DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and prtn3

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:126 Identity:25/126 - (19%)
Similarity:46/126 - (36%) Gaps:40/126 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 ESERSSNITVIF---SQPKSNATSERLSLSPP----------QEEMIVEIPDSPEASPKTSIDEN 387
            |:..|:.:||:.   |...:.||.:|..::..          |.::::...|.|       :..|
 Frog    69 ENTASNLVTVVLGAHSLRANEATKQRFRVNQVFENGFNPLTLQNDIVILKLDRP-------VSLN 126

  Fly   388 HSPQPIARRDTSDSPQPIAASEIPDSPQPTAA--------SEIPDLPQTTAINVNPELTQQ 440
            ...|.::        .|.|..::|...|...|        .:|||..|    .:|..:|:|
 Frog   127 GKVQVVS--------LPSANEDVPAGTQCVTAGWGRLSTEGQIPDRLQ----ELNVTVTRQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600
PHD_SF 224..>260 CDD:304600
PARM 318..>491 CDD:293666 25/126 (20%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 25/126 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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