DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pie and g2e3

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001003822.1 Gene:g2e3 / 368848 ZFINID:ZDB-GENE-030616-400 Length:706 Species:Danio rerio


Alignment Length:526 Identity:135/526 - (25%)
Similarity:237/526 - (45%) Gaps:89/526 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NKELQCLICKYSDTDDLVFGEWMIV--RNLQVHYFCLLLSTHLPQRGGDSSGILGFLLRDIREEA 66
            :::|.|.:||.|:.:...:||.:.:  .||.||:||||:|:.:.|||.:...:.|||:.||::|.
Zfish    15 DRDLICCLCKRSENNKEKYGEKVHLEQHNLAVHFFCLLMSSGICQRGEEDEDVYGFLVGDIKKEI 79

  Fly    67 AAAEKRKCWYCNKIGASLQCD--RCRSLFHLKCGLENRAVFEFCGQYKSYCYKCRPMDDYKRQLQ 129
            ..:.:.:|::|.|.|||:.|.  .||.:.|:.||||...||:|.|.:.|:|.|..|    .:...
Zfish    80 RRSSRLRCFHCKKAGASVGCSIKSCRQMVHMPCGLEQEFVFQFTGLFPSFCKKHAP----TQSCD 140

  Fly   130 SNPPRNATCPICFSSIYKVELHCVVYGDCCRLGFAHKKCMRQYALTSG-YYLRCIWCRS-ERFRD 192
            |:.....:|.||...|..:..:.|:....|...:.|:||::.||.::. ::.:|..|.: |:|:.
Zfish   141 SSHSLPHSCSICLDPIEPILSYHVLKCPACHGSWFHRKCVQNYAHSAAMFFFKCTLCNNKEQFQQ 205

  Fly   193 SIRLQSVFVPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRTYNRLS--WVILCCSSCAATS 255
            .:....:::|:|||:||.:.||:.||.:...:||...|||..||.::..|  :.|:.|..|.:..
Zfish   206 EMLRMGIYIPERDASWELEENAFVELLQVYHRCDAVKCLCHKGREHSSQSGYFEIVLCKLCGSRG 270

  Fly   256 AHLKCLVGALRLPKKRERTDFKCSMCLDVERRIAEGPARTTEETNADGDNQVDGSFYVQKLGPDA 320
            .|.||  ..:|:    ...|:.|:.|    :..|||      :|:....|.|:....:::     
Zfish   271 THRKC--SNIRV----YEADWMCADC----KTAAEG------KTSLPLPNHVESPLAIRQ----- 314

  Fly   321 ATRSLTQTPVFSEEDESERSSNITVIFSQPKSNATSERL--SLSPPQEEMIVEIPDSPEASPKTS 383
                             ||                 :||  |:|.....::.:....|..||:..
Zfish   315 -----------------ER-----------------KRLFKSISDIHSSIVAKRQCVPATSPEVL 345

  Fly   384 IDENHSPQPIARRDTSDSPQPIAASEIPDSPQPTAASEIPDLPQTTAINVNP--ELTQQTALNTI 446
            :|       :|   ...|.|......:.|.......:.:..|.|:   :.||  .|:.:.:.:.:
Zfish   346 MD-------LA---CQISQQQFTEVLVGDDDGGVMEAALQVLRQS---DFNPCCTLSVKFSKDKL 397

  Fly   447 PHSPQPEASFSTQLVS--QTFDCPQPQEQAVAKAPNSPSLPKE---DPNTLLVLKSGFQCPGEPF 506
            .::.:.:..|..:|||  |..|..:..:.|...|.||.:|..:   |..:||.|......|...|
Zfish   398 NNNIRNQRRFLRRLVSKLQVSDIFEGSDGAKNLALNSKALRDDLYFDVGSLLALSLVHGGPPLGF 462

  Fly   507 FYLVIY 512
            |...:|
Zfish   463 FSPALY 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 44/111 (40%)
PHD_SF 224..>260 CDD:304600 12/37 (32%)
PARM 318..>491 CDD:293666 31/181 (17%)
g2e3NP_001003822.1 ePHD_PHF7_G2E3_like 20..133 CDD:277139 44/112 (39%)
PHD_PHF7_G2E3_like 237..290 CDD:276971 17/58 (29%)
HECTc 433..695 CDD:294058 11/36 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574388
Domainoid 1 1.000 85 1.000 Domainoid score I8148
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110264at33208
OrthoFinder 1 1.000 - - FOG0003998
OrthoInspector 1 1.000 - - oto38829
orthoMCL 1 0.900 - - OOG6_106451
Panther 1 1.100 - - O PTHR12420
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3283
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.750

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