DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and Phf7

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001012211.1 Gene:Phf7 / 364510 RGDID:1308638 Length:380 Species:Rattus norvegicus


Alignment Length:374 Identity:117/374 - (31%)
Similarity:181/374 - (48%) Gaps:57/374 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGDSSGILGFLLRDIREEAAAAEKRK 73
            ||:|.....|....||::...||.||||||:||:.|||:|..:.|:.||:..||::|||.|.::.
  Rat    33 CLLCFQEPGDPEKLGEFLQKDNLCVHYFCLILSSKLPQKGQPNRGLHGFMPEDIKKEAARASRKV 97

  Fly    74 CWYCNKIGASLQC--DRCRSLFHLKCGLENRAVFEFCGQYKSYCYKCRPMDD-YKRQLQSNPPRN 135
            |:.|.:.||:::|  |:|...|||.||.|...:.:|.|:|||||.|.||..: ::|..      .
  Rat    98 CFVCKRKGAAIRCQKDQCVQNFHLPCGQERGCLSQFFGEYKSYCGKHRPTQNIHQRSF------G 156

  Fly   136 ATCPICFSSIYKVELHCVVYGDCCRLGFAHKKCMRQYALTSG-YYLRCIWCRS-ERFRDSIRLQS 198
            .:|.:|...:.:..:. .:...||.....|:||:::||.||. ::.:|..|.: |.|...:....
  Rat   157 ESCVLCCEDLSRASVE-NIRSPCCSQAIYHRKCIQKYAHTSAKHFFKCPQCNNREEFPQEMLRMG 220

  Fly   199 VFVPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRT--YNRLSWVILCCSSCAATSAHLKCL 261
            :.:|||||.||.:..|:.||::|...||.|.||...||.  .:...|.::.|::|.:...|..| 
  Rat   221 IHIPDRDAAWELEPGAFSELYQRYQHCDAPICLYEQGRDSFEDEGRWRLILCATCGSHGTHRDC- 284

  Fly   262 VGALRLPKKRERTDFKCSMCLDVERRIAEGPARTTEETNAD-GD--------------------N 305
             .:||...|:    ::|:.||         ||.|.:..:.: ||                    .
  Rat   285 -SSLRPNSKK----WECNECL---------PASTEDSVSENLGDTPCCSSTFCPHEPFLRATSLE 335

  Fly   306 QVDGSFYVQKLGPDAATRSLTQTPVFSEED--ESERSSNITVIFSQPKS 352
            :..||.:...|.|     ||.:.|..|...  :|.||..|.|.....||
  Rat   336 ENPGSSWTNWLQP-----SLLEKPESSSGSSCQSWRSKGIKVTKDCKKS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 49/109 (45%)
PHD_SF 224..>260 CDD:304600 11/37 (30%)
PARM 318..>491 CDD:293666 12/37 (32%)
Phf7NP_001012211.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
ePHD_PHF7_G2E3_like 33..144 CDD:277139 49/110 (45%)
PHD_PHF7_G2E3_like 246..299 CDD:276971 16/58 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..380 9/28 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335114
Domainoid 1 1.000 93 1.000 Domainoid score I7367
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110264at33208
OrthoFinder 1 1.000 - - FOG0003998
OrthoInspector 1 1.000 - - otm45386
orthoMCL 1 0.900 - - OOG6_106451
Panther 1 1.100 - - O PTHR12420
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3283
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.750

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