DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pie and Kmt2a

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_038938273.1 Gene:Kmt2a / 315606 RGDID:1586165 Length:3986 Species:Rattus norvegicus


Alignment Length:589 Identity:128/589 - (21%)
Similarity:205/589 - (34%) Gaps:173/589 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDNKELQCLIC-KYSDTDDLVFGEWMIV-RNLQVHYFCLLLSTHLPQRGGDSSGILGFLLRDIR 63
            ::||:  ||.:| .|.|......|..:.: :|...|..|.|.|..:.:   |..|    .|:::.
  Rat  1888 IDDNR--QCALCLMYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFE---DDDG----SLKNVH 1943

  Fly    64 EEAAAAEKRKCWYCNKIGASLQC--DRCRSLFHLKCGLENRAVFEFCGQYKSYCYKCRPMDDYKR 126
            ......::.:|.:|.|.||::.|  ..|.|.:|..|......|  |....|.||.:.|  |..|.
  Rat  1944 MAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCV--FLDDKKVYCQRHR--DLIKG 2004

  Fly   127 QLQSNPPRNATCPICFSSIYKV--------------------ELHCVVYG---DC---------C 159
            ::   .|.|.     |....:|                    .:|.::..   ||         |
  Rat  2005 EV---VPENG-----FEVFRRVFVDFEGISLRRKFLNGLEPESVHVMIGSMTIDCLGILNDLSDC 2061

  Fly   160 R-----LGFAHKKCMRQYALTSGYYLRCIW-CRSERFRDSIRLQSVFVPDRDATWEKQRNAYREL 218
            .     :|:   :|.|.|..|:....||:: |:....|     ..|..||.::|.|         
  Rat  2062 EDKLFPIGY---QCSRVYWSTTDARKRCVYTCKIMECR-----PPVVEPDINSTVE--------- 2109

  Fly   219 HERNLKCDQPNCLCPSGRT--YNRLSWVILCCSSCAATSAHLKCLVGALRLPKKRERTDFKCSMC 281
            |:.|             ||  ::..|::...|....:|:|.|.  ..:...|:.:..:...|.:.
  Rat  2110 HDDN-------------RTIAHSPSSFIEASCKDSQSTAAILS--PPSPDRPRSQASSSCYCHVI 2159

  Fly   282 LDVER------------------RIAEGPARTTEETNADGDNQVDGSFYVQKLGPDA-ATRSLT- 326
            ..|.|                  ..|..|..||.|....||..:...  ::.:|... :|.||: 
  Rat  2160 SKVPRIRTPSYSPTQRSPGCRPLPSAGSPTPTTHEIVTVGDPLLSSG--LRSIGSRRHSTSSLSP 2222

  Fly   327 -------QTPVFSEEDESERSSNITV----IFSQPKSNA----------TSERLSLSPP----QE 366
                   .:||.|....| |||..:|    ..:.|:|:|          :|..|..|.|    .:
  Rat  2223 LRSKLRIMSPVRSGSVYS-RSSVSSVPSLGTATDPESSAKATDRAGPLNSSANLGHSTPVSSGSQ 2286

  Fly   367 EMIVEIPDSPEASPKTSIDENHSPQPIARRDTSD-SPQPIA---------ASEIPD-SPQPTAAS 420
            ..:|      ....|||..:..|...:.|...|| :|:..:         .|:..| |...||.|
  Rat  2287 RTVV------TGGSKTSHLDGSSSSGVKRSSASDLAPKGSSLKGEKNRTPGSKSTDGSAHNTAYS 2345

  Fly   421 EIPDL-PQTTAINVNPELTQQTAL------NTIPHSPQPEASFSTQLVSQTFDCPQPQE--QAVA 476
            .||.| ||  .:|..|.....:.:      :|:|.|.:..:.....|..|..|..|..:  |:|.
  Rat  2346 GIPKLAPQ--VLNAAPGELNVSKIGTFAEPSTVPFSKETVSYPQLHLRGQRSDRDQHMDSTQSVK 2408

  Fly   477 KAPN 480
            .:||
  Rat  2409 PSPN 2412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 28/111 (25%)
PHD_SF 224..>260 CDD:304600 7/37 (19%)
PARM 318..>491 CDD:293666 51/210 (24%)
Kmt2aXP_038938273.1 zf-CXXC 1145..1192 CDD:366873
PHD1_KMT2A 1451..1497 CDD:277063
PHD2_KMT2A 1499..1548 CDD:277065
PHD3_KMT2A 1586..1645 CDD:277067
Bromo_ALL-1 1668..1798 CDD:99925
ePHD_KMT2A 1892..2004 CDD:277163 31/124 (25%)
FYRN 2045..2092 CDD:399155 11/49 (22%)
FYRC 3686..3769 CDD:197781
SET_KMT2A_2B 3833..3986 CDD:380947
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.