DRSC/TRiP Functional Genomics Resources

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Protein Alignment pie and Phf11b

DIOPT Version :9

Sequence 1:NP_001260348.1 Gene:pie / 44315 FlyBaseID:FBgn0005683 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_006518990.1 Gene:Phf11b / 236451 MGIID:3645789 Length:293 Species:Mus musculus


Alignment Length:250 Identity:57/250 - (22%)
Similarity:102/250 - (40%) Gaps:38/250 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDNKELQCLICKYSDTDDLVFGEWMIV-----RNLQVHYFCLLLSTHLPQRGGDS--SGILGFL 58
            :|..::..|.:|....       ||..:     .|:..|..|||.|:.|.:.....  :.|..|.
Mouse    20 IEKMEKRTCALCPEGH-------EWSQIYFSPSGNIVAHENCLLYSSGLVESEAPDLPNTIRNFD 77

  Fly    59 LRDIREEAAAAEKRKCWYCNKIGASLQCD--RCRSLFHLKCGLENRAVF---EFCGQYKSYCYKC 118
            ::.:::|.....:.||.:|...||::.||  .|...:||.|.:|:.|:.   |..|.||.:|.|.
Mouse    78 VKSVKKEIGRGRRLKCSFCKNKGATMGCDLQSCTKNYHLSCAMEDHAILQVDEDHGTYKLFCQKH 142

  Fly   119 RPMDDYKRQLQSNPPRNATCPICF------SSIYKVELHCVVYGDCCRLGFAHKKCMRQYALTSG 177
            .|      :.|....|:||....|      :.:..|.|..::.    ::...|.:.:.:.|..|.
Mouse   143 AP------EAQEPTQRDATVKAPFLKKCQEAGLLNVLLEYILE----KMDLIHGRLLDETASESD 197

  Fly   178 YY-LRCIWCRSERFRDS-IRLQSVFVPDRDATWEKQRNAYRELHERNLKCDQPNC 230
            |. :..:...|..|.|: |:.|.| :..:...||:::...::..|......|..|
Mouse   198 YEGIETLLFESGLFEDTLIQFQEV-IKSKACEWEERQRLMKQQLEALADLQQSLC 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pieNP_001260348.1 PHD_SF 9..117 CDD:304600 32/119 (27%)
PHD_SF 224..>260 CDD:304600 1/6 (17%)
PARM 318..>491 CDD:293666
Phf11bXP_006518990.1 PHD_SF 28..142 CDD:389947 32/120 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12420
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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