DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-1 and AVA-P4

DIOPT Version :9

Sequence 1:NP_476801.1 Gene:Vha16-1 / 44307 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001185404.1 Gene:AVA-P4 / 843898 AraportID:AT1G75630 Length:200 Species:Arabidopsis thaliana


Alignment Length:193 Identity:101/193 - (52%)
Similarity:126/193 - (65%) Gaps:37/193 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSEVSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGI 66
            ||..|.|..  .||||.:|||:|::||.:||||||||||.|:|:|.||||||:||||:||||||:
plant     3 SSGFSGDET--APFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 65

  Fly    67 IAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR------- 123
            :.||||::||:|:..:...:| |.|:.|:.||.:|||.|.:||:||.|||||||||||       
plant    66 LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRVVDCNPD 130

  Fly   124 ---------------------------GTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 159
                                       ..||||:|||||||||||||.|.||||||.|.|.::
plant   131 SKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-1NP_476801.1 V_ATP_synt_C 15..122 CDD:130170 67/107 (63%)
ATP-synt_Vo_c_ATP6C_rpt2 90..157 CDD:349416 48/100 (48%)
AVA-P4NP_001185404.1 V_ATP_synt_C 14..122 CDD:130170 67/107 (63%)
ATP-synt_C 95..191 CDD:278563 46/95 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 96 1.000 Domainoid score I2452
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I1314
OMA 1 1.010 - - QHG53914
OrthoDB 1 1.010 - - D1534092at2759
OrthoFinder 1 1.000 - - FOG0001101
OrthoInspector 1 1.000 - - mtm8409
orthoMCL 1 0.900 - - OOG6_100711
Panther 1 1.100 - - O PTHR10263
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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