DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-1 and AVA-P1

DIOPT Version :10

Sequence 1:NP_476801.1 Gene:Vha16-1 / 44307 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_195198.1 Gene:AVA-P1 / 829624 AraportID:AT4G34720 Length:164 Species:Arabidopsis thaliana


Alignment Length:158 Identity:100/158 - (63%)
Similarity:125/158 - (79%) Gaps:3/158 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEVSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 67
            |..|.|..  .||||.:|||:|::||.:||||||||||.|:|:|.||||||:||||:||||||::
plant     2 STFSGDET--APFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVL 64

  Fly    68 AIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 131
            .||||::||:|:..:...:| |.|:.|:.||.:|||.|.:||:||.|||||||||||..||||:|
plant    65 GIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKL 129

  Fly   132 FVGMILILIFAEVLGLYGLIVAIYLYTK 159
            ||||||||||||.|.||||||.|.|.::
plant   130 FVGMILILIFAEALALYGLIVGIILSSR 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-1NP_476801.1 V_ATP_synt_C 15..122 CDD:130170 67/107 (63%)
ATP-synt_Vo_c_ATP6C_rpt2 90..157 CDD:349416 48/66 (73%)
AVA-P1NP_195198.1 V_ATP_synt_C 12..120 CDD:130170 67/107 (63%)
ATP-synt_Vo_c_ATP6C_rpt2 88..155 CDD:349416 48/66 (73%)

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