DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1B and MYO3

DIOPT Version :9

Sequence 1:NP_001123630.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1136 Species:Homo sapiens
Sequence 2:NP_012793.2 Gene:MYO3 / 853729 SGDID:S000001612 Length:1272 Species:Saccharomyces cerevisiae


Alignment Length:1226 Identity:377/1226 - (30%)
Similarity:599/1226 - (48%) Gaps:259/1226 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     5 EVKTSLLD----NMIGVGDMVLLEPLNEETFINNLKKRFDHSEIYTYIGSVVISVNPYRSLPIYS 65
            ::|.:..|    ..:|:.|:.||..:::|:...||||||.:..||||||.|:|||||:|.|.||:
Yeast    22 KIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYT 86

Human    66 PEKVEEYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCG 130
            ...:|.|:.:|..|:.||:||:::..|.:|:..:::||::|:||||||||||:|.:|.|:||...
Yeast    87 NAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASN 151

Human   131 KGAE-VNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSR 194
            ..:| :.::|:.:|.:||:||:||.|||:||:||||.|||::|:|:.:.:|..|.|:||||||.|
Yeast   152 SHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQR 216

Human   195 VVKQPRGERNFHVFYQLLSGASEELLNKLKLERDFSRYNY-LSLDSAKVNGVDDAANFRTVRNAM 258
            ||.|.:.|||||:|||...|||:.......::.. .:|.| .:......:.:||..::.....||
Yeast   217 VVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMP-EQYIYTAAAGCTTADTIDDVKDYEGTLEAM 280

Human   259 QIVGFMDHEAESVLAVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELTGIDQSVLERA 323
            :.:|.:..|.:.:..::||:|.:|||.|......|    :::.|.:....:..|..:|.|:|.:.
Yeast   281 RTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGN----AQVGDTSVTDFVAYLLQVDASLLVKC 341

Human   324 FSFRTVEA----KQEKV-STTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVM 383
            ...|.::.    |:..| ...||..||...||||||.:|:.||.|:|:|:|.|::|.....|.: 
Yeast   342 LVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSI- 405

Human   384 GVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDL 448
            |:||||||||||.|||||..|||.|||||||||:||||.|||.|.||.|:||.|.||:|.::|||
Yeast   406 GILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDL 470

Human   449 IE-NNTNGILAMLDEECL---RPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTSLPHSC 509
            || .|..||||.:::...   ......|:.|.::|| :..::.:||.|.:|              
Yeast   471 IEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLN-LFNSNPYFELRANK-------------- 520

Human   510 FRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKASHALIKSLFPEGNPAKINLKRPPTAGSQF 574
            |.|:||||.|.|.:.|..|||.|.|.:||.:.:...::..:.::||: :..|.:.:||||||.:.
Yeast   521 FVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPD-DVDKDSKRRPPTAGDKI 584

Human   575 KASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFNEALVCHQIRYLGLLENVRVRRAGYAFRQAYE 639
            ..|...|::.|....|:|||.||||..|:.:.:::..|.||::||||.||||:||||:|:||.:|
Yeast   585 IKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFE 649

Human   640 PCLERYKML---CKQTWPH-WKGPARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLEDLR 700
            ..:||:.:|   |.....: |.|.....|:::..:..||.:|:..|.:.:||:.|.:||.|||:|
Yeast   650 KFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMR 714

Human   701 KQRLEDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWYRRYAQQKRYQQTKSSALVIQSYIR--- 762
            .:...::|..||:                      || ||:.|::     ..:|:.||..||   
Yeast   715 DKYWYNMAARIQR----------------------AW-RRFLQRR-----IDAAIKIQRTIREKK 751

Human   763 -----------------GWKARKILRELKHQK------RCKEAVTTIAAYWHGTQARRELRRLKE 804
                             |.|.|:.:..|.::.      .|.|:.|      .|:..||:: .:|:
Yeast   752 GGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKT------KGSYIRRQV-GIKD 809

Human   805 EARNKHAIAVIWAYWLGSKARRELKRLKE-------------EARRKHAVAVIWAYWLGLKVRRE 856
            :     .:..|....|.||..|..:|||:             :.|.::|:              :
Yeast   810 K-----VVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAM--------------K 855

Human   857 YRKFFRANAGKKIYEFTLQRIVQKYF-------------------LEMKNKMPSLSP--IDKNWP 900
            |.:.::.:.| ||.:.:|..:...:.                   .|:..::..|:.  :.|..|
Yeast   856 YTQDYKIDVG-KIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGP 919

Human   901 SRPYLFLDSTHKELKRIFHLWRCK------KYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSV 959
            :..|      ||:..:: |..|.|      ||.|.:  :...||..:...:....:||...|..:
Yeast   920 TIEY------HKQPNKL-HTVRSKISDSAPKYGDIY--KSSTIYVRRGHPANSKSNKKPKNPGGL 975

Human   960 -GQPF---------------------------------------------QGAYLEINKNPKYKK 978
             |:|.                                             |.||     |||..|
Yeast   976 SGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAY-----NPKPDK 1035

Human   979 LKDAIEEKIIIAEVVNK------------INRANG--KSTSRIFLLTNNNLLLADQKSGQIKSEV 1029
            ........|..|:|.:|            :.:|:.  ||:|     ...|.:......|..|::.
Yeast  1036 TVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSS-----AKQNQVSMPPSKGVEKNKE 1095

Human  1030 PLVDVTKVSMSS-------------QNDGFFAVHLKEGSEAAS-----KGDFLFSS 1067
            ||.:.|..:.::             ::..|.|.:...||.::|     |||.:|.|
Yeast  1096 PLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFIS 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1BNP_001123630.1 MYSc_Myo1 29..688 CDD:276829 273/673 (41%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 578..600 9/21 (43%)
IQ 749..771 CDD:197470 8/41 (20%)
Myosin_TH1 941..1118 CDD:399188 36/205 (18%)
MYO3NP_012793.2 COG5022 1..1258 CDD:227355 377/1226 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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