DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1B and didum

DIOPT Version :9

Sequence 1:NP_001123630.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1136 Species:Homo sapiens
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:1204 Identity:370/1204 - (30%)
Similarity:586/1204 - (48%) Gaps:211/1204 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    14 MIGVGDMVLLEPLNEETFINNLKKRF-DHSEIYTYIGSVVISVNPYRSLPIYSPEKVEEYRNRNF 77
            ::|..|:..|..|:|...::||:.|| :...||||.|.:::::|||..:|:|.|..:..||....
  Fly    69 LVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAM 133

Human    78 YELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAVCGKGAEVNQVKEQL 142
            .:|.||||||::|||..|..::.:..|:::||||||||.::|..|.|.|||.|..:| .||:.::
  Fly   134 GDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESE-TQVERKV 197

Human   143 LQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPL---GGVISNYLLEKSRVVKQPRGERN 204
            |.|:|::||||||||.||||||||||:..:.|..:...:   |..:..|||||||||.|.:||||
  Fly   198 LASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERN 262

Human   205 FHVFYQLLSGASEELLNKLKLERDFSRYNYLSLDSA-KVNGVDDAANFRTVRNAMQIVGFMDHEA 268
            :|:||||.:..|:  ..:|.|:.. .::.:|::..| ::..|.||..|.....||.::||...:.
  Fly   263 YHIFYQLCAARSK--YPELVLDHQ-DKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQI 324

Human   269 ESVLAVVAAVLKLGNIE----FKPESRVNGLDESKIKDKN-ELKEICELTGIDQSVLERAFSFRT 328
            ..::.::|.:|.||||:    |...|.....|...|...: .|:...:|..:....|.|....|.
  Fly   325 ADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRK 389

Human   329 VEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEI 393
            :|:..|.|....::..|..|||||||::|::||.::|..:|:|:...:| :...:|||||||||.
  Fly   390 IESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSK-QCSFIGVLDIYGFET 453

Human   394 FEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILA 458
            ||.||||||.|||.||||||.|.:...|.|||||::|.|.||.||:::|....||||:.. |:|.
  Fly   454 FEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL-GVLD 517

Human   459 MLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTSLPHSCFRIQHYAGKVLYQV 523
            :|||||..| ..:||::..||...|....|||.     .|| ..||     |.|:|::..|.|.|
  Fly   518 LLDEECRMP-KGSDESWAGKLIGKCNKFPHFEK-----PRF-GTTS-----FFIKHFSDTVEYDV 570

Human   524 EGFVDKNNDLLYRDLSQAMWKASHALIKSLF-----------------------------PEGN- 558
            .||::||.|.:.::|:|.:.:::.:|.|.:.                             .:|| 
  Fly   571 NGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGND 635

Human   559 ------PAKINLKRPPTAGSQFKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFNEALVCHQIR 617
                  |:|.:.|   |.||||:.|:|:|:..|....|:|:|||||||.|.|..:..|.:..|:|
  Fly   636 TRRRVVPSKQHRK---TVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLR 697

Human   618 YLGLLENVRVRRAGYAFRQAYEPCLERYKML--------------CKQTWPHWKGPARSGVEVLF 668
            ..|:||.||:..||:..|..|.....||::|              |:.....|          :.
  Fly   698 ACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKW----------IQ 752

Human   669 NELEIPVEEYSFGRSKIFIRNPRTLFKLEDLRKQRLEDLATLIQKIYRGWKCRTHFLLMKKSQIV 733
            :|     ::|.||.::||.|..:..| ||.:|....:...|::|.:.|.:..|..||.::|....
  Fly   753 DE-----DKYRFGNTQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVING 811

Human   734 IAAWYRRYAQQKRYQQTKS--SALVIQSYIRGWKARKILRELKHQKRCKEAVTTIAAYWHGTQAR 796
            |....|.|..::|.|:.:.  :.|::..|.|||..|:....|:|      :::.|..|..|..||
  Fly   812 IQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRH------SISGIQTYARGMLAR 870

Human   797 RELRRLKEEARNKHAIAV-IWAYWLGSKARRELKRLKEEARRKHAVAVIWAYWLGLKVRR--EYR 858
            .:...:::     |..|| |..:..|:.|||..::     ||::.:....|      :||  ..|
  Fly   871 NKFHAMRD-----HYRAVQIQRFVRGALARRAYQK-----RRRNIIICQAA------IRRFLARR 919

Human   859 KFFRANAGKKIYEFTLQRIVQKYFLEMKNKMPSLSP-IDKNWPSRPYLFLDST---HK------- 912
            ||.|..|..|    |:..:..|| :.::||:.|:.. ||:       |..|::   ||       
  Fly   920 KFKRMKAEAK----TISHMENKY-MGLENKIISMQQRIDE-------LNRDNSNLKHKTSEISVL 972

Human   913 ----ELKRIFHLWRCKKYRDQFTDQQKLI-----------------YEEKLEASELFKDKKALYP 956
                |||:.... ..|..:....|:.|||                 .||...|.|.:..:|..:.
  Fly   973 KMKLELKKTLEA-EFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWISQKQTWR 1036

Human   957 SSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNK-INRANGKSTSRIFLLTNNNLLLADQ 1020
            .. .:..:....||....|..::....:|..::||:.|: :|.|..::.....::.|.|.:|   
  Fly  1037 QE-NEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFML--- 1097

Human  1021 KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGD------------------FLFSS 1067
                           |..:|....|.|::|.::.|.|:|:.:                  .|.|.
  Fly  1098 ---------------KEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSK 1147

Human  1068 DHLIEMATKL---YRTTLSQTKQKLNIEISDEFL 1098
            ::....:|.|   .|:.|.:.|||..: :.::::
  Fly  1148 NYSYNDSTSLVVKLRSILEEEKQKHKV-LQEQYI 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1BNP_001123630.1 MYSc_Myo1 29..688 CDD:276829 262/718 (36%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 578..600 10/21 (48%)
IQ 749..771 CDD:197470 6/23 (26%)
Myosin_TH1 941..1118 CDD:399188 32/180 (18%)
didumNP_724569.1 MYSc 65..778 CDD:214580 271/745 (36%)
MYSc_Myo5 84..767 CDD:276831 262/718 (36%)
IQ 900..922 CDD:197470 7/32 (22%)
GBP_C <971..1086 CDD:303769 22/116 (19%)
coiled coil 1049..1068 CDD:293879 3/18 (17%)
coiled coil 1077..1086 CDD:293879 2/8 (25%)
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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