DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh and IDP1

DIOPT Version :9

Sequence 1:NP_001137910.2 Gene:Idh / 44291 FlyBaseID:FBgn0001248 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_010217.1 Gene:IDP1 / 851493 SGDID:S000002224 Length:428 Species:Saccharomyces cerevisiae


Alignment Length:433 Identity:263/433 - (60%)
Similarity:327/433 - (75%) Gaps:17/433 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ISMDNERMSAVSEHSSVVCSPEQMAQKIKA-GPVVDVLGDEMTRIIWDSIKSQLILPFLDIELHT 104
            :||.:.|:.:.|..::.        .|||. .|||::.||||||||||.||.:||||:||::|..
Yeast     1 MSMLSRRLFSTSRLAAF--------SKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKY 57

  Fly   105 YDLGIENRDKTEDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTIRNILGGT 169
            |||.:|:||.|.|::|.|.|||||||.||||||||||||.||:||||.|||||||||||||||||
Yeast    58 YDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGT 122

  Fly   170 VFREAIICKNVPRLVTGWQKPIVIGRHAHADQYKAVDYVVPGPGKLTLTWKGTD---GQVIDEVI 231
            ||||.|:...:||||..|:|||:||||||.|||||.|.::||||.|.|.:|.:|   .|.....:
Yeast   123 VFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQPQTLKV 187

  Fly   232 NDFKGPGIALGMFNTDDSIVDFAHASFKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLYNKQY 296
            .|:||.|:|:.|:|||:||..|||:|||.|:|:||.|::||||||||||||||||||:::|..||
Yeast   188 YDYKGSGVAMAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQY 252

  Fly   297 KKEYEAAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLLCPDG 361
            |.::|..||.|||||||||||..:||:|||:.|.||||||||||.||||:||||||||:|:.|||
Yeast   253 KSKFEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDG 317

  Fly   362 KTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCID 426
            ||.|:||||||||||:|.||:|:|||||.|||||||:||||.|.:|||...|.:||:.||...::
Yeast   318 KTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLN 382

  Fly   427 TI-ESGAMTKDLAICIKGNINAVTRRDYQETFEFINTLAKNLE 468
            |: :.|.||||||:....|    .|..|..|.||::.:.|.|:
Yeast   383 TVQQDGIMTKDLALACGNN----ERSAYVTTEEFLDAVEKRLQ 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdhNP_001137910.2 PTZ00435 63..474 CDD:240417 259/411 (63%)
IDP1NP_010217.1 PRK08299 18..424 CDD:236226 259/408 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344746
Domainoid 1 1.000 508 1.000 Domainoid score I48
eggNOG 1 0.900 - - E1_COG0538
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21195
Inparanoid 1 1.050 520 1.000 Inparanoid score I193
Isobase 1 0.950 - 0 Normalized mean entropy S172
OMA 1 1.010 - - QHG62611
OrthoFinder 1 1.000 - - FOG0001185
OrthoInspector 1 1.000 - - otm46900
orthoMCL 1 0.900 - - OOG6_100639
Panther 1 1.100 - - LDO PTHR11822
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5145
SonicParanoid 1 1.000 - - X809
TreeFam 1 0.960 - -
1615.740

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