DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh and cICDH

DIOPT Version :10

Sequence 1:NP_001137910.2 Gene:Idh / 44291 FlyBaseID:FBgn0001248 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_176768.1 Gene:cICDH / 842905 AraportID:AT1G65930 Length:410 Species:Arabidopsis thaliana


Alignment Length:408 Identity:271/408 - (66%)
Similarity:329/408 - (80%) Gaps:5/408 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QKIK-AGPVVDVLGDEMTRIIWDSIKSQLILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKK 129
            :||| |.|:|::.||||||:||.|||.:||.||:::::..:|||:.:||.|:|:|||:.|||.||
plant     4 EKIKVANPIVEMDGDEMTRVIWKSIKDKLITPFVELDIKYFDLGLPHRDATDDKVTIESAEATKK 68

  Fly   130 YNVGIKCATITPDEKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIVIG 194
            |||.||||||||||.||.||.||:||:||||||||||.||||||.|||||||:||.||.|||.||
plant    69 YNVAIKCATITPDEGRVTEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVPKLVPGWTKPICIG 133

  Fly   195 RHAHADQYKAVDYVVPGPGKLTLTWKGTDGQVIDEVINDFKGP-GIALGMFNTDDSIVDFAHASF 258
            |||..|||:|.|.|:.||||||:|::|.||:...||.. |.|. |:|:.|:|||:||..||.||.
plant   134 RHAFGDQYRATDAVIKGPGKLTMTFEGKDGKTETEVFT-FTGEGGVAMAMYNTDESIRAFADASM 197

  Fly   259 KYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLYNKQYKKEYEAAGIWYEHRLIDDMVAYAMKSE 323
            ..|.::|.|||:||||||||||||||||||:::|...:|.:|:||||||||||||||||||:|||
plant   198 NTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKYDAAGIWYEHRLIDDMVAYALKSE 262

  Fly   324 GGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETST 388
            ||:||||||||||||||.:|||:||||||||||:||||||:||||||||||||||.:|:|.||||
plant   263 GGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETST 327

  Fly   389 NPIASIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIKGNINAVTRRDY 453
            |.|||||||||||.||||||:|..|..|.:.||..|:.|:|||.||||||:.|.|  :.::|..|
plant   328 NSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACVGTVESGKMTKDLALIIHG--SKLSRDTY 390

  Fly   454 QETFEFINTLAKNLEGAL 471
            ..|.|||:.:|..|:..|
plant   391 LNTEEFIDAVAAELKERL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdhNP_001137910.2 PTZ00435 63..474 CDD:240417 271/408 (66%)
cICDHNP_176768.1 PLN00103 1..408 CDD:177720 270/406 (67%)

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