DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idh and ICDH

DIOPT Version :9

Sequence 1:NP_001137910.2 Gene:Idh / 44291 FlyBaseID:FBgn0001248 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_175836.1 Gene:ICDH / 841875 AraportID:AT1G54340 Length:416 Species:Arabidopsis thaliana


Alignment Length:413 Identity:269/413 - (65%)
Similarity:322/413 - (77%) Gaps:8/413 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QKIKA-GPVVDVLGDEMTRIIWDSIKSQLILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKK 129
            :|||. .|||::.||||||:||..||.:||.|||::::..:|||:.|||.|:|:|||:.|||..|
plant     4 EKIKVINPVVEMDGDEMTRVIWKFIKDKLIFPFLELDIKYFDLGLPNRDFTDDKVTIETAEATLK 68

  Fly   130 YNVGIKCATITPDEKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIVIG 194
            |||.||||||||||.||.||.|||||:||||||||||.||||||.|||:|:||||.||.|||.||
plant    69 YNVAIKCATITPDEARVREFGLKKMWRSPNGTIRNILNGTVFREPIICRNIPRLVPGWTKPICIG 133

  Fly   195 RHAHADQYKAVDYVVPGPGKLTLTWK--GTDGQVIDEVINDFKGPGIALGMFNTDDSIVDFAHAS 257
            |||..|||:|.|.:|..||||.|.::  |:..:...||.| |.|.|:||.|:|||:||..||.:|
plant   134 RHAFGDQYRATDLIVNEPGKLKLVFEPSGSSQKTEFEVFN-FTGGGVALAMYNTDESIRAFAESS 197

  Fly   258 FKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLYNKQYKKEYEAAGIWYEHRLIDDMVAYAMKS 322
            ...|..:|.|||:||||||||.|||||||||:::|...::.:|||||||||||||||||||||||
plant   198 MYTAYQKKWPLYLSTKNTILKIYDGRFKDIFQEVYEANWRSKYEAAGIWYEHRLIDDMVAYAMKS 262

  Fly   323 EGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETS 387
            |||:||||||||||||||.:||||||||:|||||:||||||:||||||||||||:|.:|:|.|||
plant   263 EGGYVWACKNYDGDVQSDFLAQGYGSLGMMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETS 327

  Fly   388 TNPIASIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIKGNINAVTRRD 452
            ||.|||||||:|||.||||||:|..|..:.:.||..|:.|:|||.||||||:.|.|   |..|||
plant   328 TNSIASIFAWSRGLAHRAKLDSNAALLSYTEKLEAACMGTVESGKMTKDLALLIHG---AKVRRD 389

  Fly   453 -YQETFEFINTLAKNLEGALAKN 474
             |..|.|||:.:|..|:..|..|
plant   390 QYVNTEEFIDAVAWELKRRLLGN 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdhNP_001137910.2 PTZ00435 63..474 CDD:240417 268/411 (65%)
ICDHNP_175836.1 PLN00103 1..409 CDD:177720 267/408 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 533 1.000 Domainoid score I60
eggNOG 1 0.900 - - E1_COG0538
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 553 1.000 Inparanoid score I253
OMA 1 1.010 - - QHG62611
OrthoDB 1 1.010 - - D769322at2759
OrthoFinder 1 1.000 - - FOG0001185
OrthoInspector 1 1.000 - - otm2951
orthoMCL 1 0.900 - - OOG6_100639
Panther 1 1.100 - - O PTHR11822
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X809
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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