DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idh and idh2

DIOPT Version :9

Sequence 1:NP_001137910.2 Gene:Idh / 44291 FlyBaseID:FBgn0001248 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_955858.1 Gene:idh2 / 386951 ZFINID:ZDB-GENE-031118-95 Length:449 Species:Danio rerio


Alignment Length:449 Identity:275/449 - (61%)
Similarity:329/449 - (73%) Gaps:20/449 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KISMDNERMSAVSEHSSVVCSPE--------------QMAQKIKAGPVVDVLGDEMTRIIWDSIK 90
            |:.....|.:|....|..|.:|.              |:||     |||::.|||||||||:.||
Zfish     6 KVLSSLSRSAATLSKSPAVLAPACQSLQQRNYADKRIQVAQ-----PVVEMDGDEMTRIIWEFIK 65

  Fly    91 SQLILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFNLKKMW 155
            .:|||..::::|..||||:..||:|:||||||.|.|.|||||.:|||||||||.|||||.|||||
Zfish    66 EKLILTNVNVDLKYYDLGLPYRDQTDDQVTIDSAIATKKYNVAVKCATITPDEARVEEFKLKKMW 130

  Fly   156 KSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIVIGRHAHADQYKAVDYVVPGPGKLTLTWK 220
            ||||||||||||||||||.|||||:||||.||.:.|.|||||..|||||.|:||..|||..:.:.
Zfish   131 KSPNGTIRNILGGTVFREPIICKNIPRLVPGWTQAITIGRHAFGDQYKATDFVVNQPGKFKMVFT 195

  Fly   221 GTDGQVIDE-VINDFKGPGIALGMFNTDDSIVDFAHASFKYALDRKLPLYMSTKNTILKKYDGRF 284
            ..||....| .:.||.|.|..:||:|||:||..|||:.|:||:.:|.||||||||||||.|||||
Zfish   196 PADGSKNKEWEVYDFPGGGCGMGMYNTDESITGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRF 260

  Fly   285 KDIFEDLYNKQYKKEYEAAGIWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSVAQGYGSL 349
            ||||:|::.|.||.|::...|||||||||||||..:||.|.|||||||||||||||.:|||:|||
Zfish   261 KDIFQDIFEKNYKPEFDKLKIWYEHRLIDDMVAQVLKSSGAFVWACKNYDGDVQSDILAQGFGSL 325

  Fly   350 GLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNEPLK 414
            |||||||:||||||:||||||||||||:|.:|:|:.||||||||||||||||.||.|||.|..|.
Zfish   326 GLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNPDLI 390

  Fly   415 QFADTLEQVCIDTIESGAMTKDLAICIKGNINAVTRRDYQETFEFINTLAKNLEGALAK 473
            :|:.|||:||::|:|||.||||||.||.|..|......|..|.:|::.:..||:.||.|
Zfish   391 KFSQTLERVCVETVESGVMTKDLAGCIHGLANCKLNEHYVNTTDFLDAIKTNLDKALGK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdhNP_001137910.2 PTZ00435 63..474 CDD:240417 269/412 (65%)
idh2NP_955858.1 PTZ00435 37..449 CDD:240417 268/416 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248894at33208
OrthoFinder 1 1.000 - - FOG0001185
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5145
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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