DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh and Idh1

DIOPT Version :9

Sequence 1:NP_001137910.2 Gene:Idh / 44291 FlyBaseID:FBgn0001248 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_113698.1 Gene:Idh1 / 24479 RGDID:2862 Length:414 Species:Rattus norvegicus


Alignment Length:412 Identity:301/412 - (73%)
Similarity:357/412 - (86%) Gaps:3/412 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 MAQKIKAGPVVDVLGDEMTRIIWDSIKSQLILPFLDIELHTYDLGIENRDKTEDQVTIDCAEAIK 128
            |::||..|.||::.|||||||||:.||.:||||:::::||:|||||||||.|.||||.|.|||||
  Rat     1 MSRKIHGGSVVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIK 65

  Fly   129 KYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNVPRLVTGWQKPIVI 193
            |||||:|||||||||||||||.||:||||||||||||||||||||||||||:|||||||.|||:|
  Rat    66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIII 130

  Fly   194 GRHAHADQYKAVDYVVPGPGKLTLTWKGTDG-QVIDEVINDF-KGPGIALGMFNTDDSIVDFAHA 256
            ||||:.|||:|.|:|||||||:.:|:...|| |.:..:::|| :|.|:|:||:|.|.||.||||:
  Rat   131 GRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSIEDFAHS 195

  Fly   257 SFKYALDRKLPLYMSTKNTILKKYDGRFKDIFEDLYNKQYKKEYEAAGIWYEHRLIDDMVAYAMK 321
            ||:.||.:..|||:||||||||||||||||||:::|:||||.::||..|||||||||||||.|||
  Rat   196 SFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSKFEAQKIWYEHRLIDDMVAQAMK 260

  Fly   322 SEGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLLCPDGKTVEAEAAHGTVTRHFRFYQQGKET 386
            |||||:|||||||||||||||||||||||:|||||:|||||||||||||||||||:|.||:|:||
  Rat   261 SEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQET 325

  Fly   387 STNPIASIFAWTRGLLHRAKLDNNEPLKQFADTLEQVCIDTIESGAMTKDLAICIKGNINAVTRR 451
            |||||||||||:|||.||||||||..|..||:.||:|||:|||:|.||||||.||||..| |.|.
  Rat   326 STNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPN-VQRS 389

  Fly   452 DYQETFEFINTLAKNLEGALAK 473
            ||..||||::.|.:||:..||:
  Rat   390 DYLNTFEFMDKLGENLKAKLAQ 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IdhNP_001137910.2 PTZ00435 63..474 CDD:240417 301/412 (73%)
Idh1NP_113698.1 PTZ00435 1..411 CDD:240417 300/410 (73%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:O75874 94..100 5/5 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345702
Domainoid 1 1.000 587 1.000 Domainoid score I195
eggNOG 1 0.900 - - E1_COG0538
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21195
Inparanoid 1 1.050 626 1.000 Inparanoid score I820
OMA 1 1.010 - - QHG62611
OrthoDB 1 1.010 - - D248894at33208
OrthoFinder 1 1.000 - - FOG0001185
OrthoInspector 1 1.000 - - oto97992
orthoMCL 1 0.900 - - OOG6_100639
Panther 1 1.100 - - LDO PTHR11822
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X809
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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