DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flw and Ppp5c

DIOPT Version :9

Sequence 1:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster
Sequence 2:XP_006228527.2 Gene:Ppp5c / 65179 RGDID:68415 Length:594 Species:Rattus norvegicus


Alignment Length:291 Identity:115/291 - (39%)
Similarity:161/291 - (55%) Gaps:34/291 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 LQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAAN-YLFLGDYVDRGKQSLETICLLLAY 240
            |:.|:..:.| .:.:|||.|||:.|||.:||..|.|...| |:|.||:||||..|:|.|..|..:
  Rat   321 LRWPLFFQTE-KITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGF 384

  Fly   241 KIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKIFCCHGG 305
            |:.||::|.|||||||..::|:||||..|.|.:|..::::.|::.|..||:|..|:.|:...|||
  Rat   385 KLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGG 449

  Fly   306 L-SPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGVDVVSKFLNRH 369
            | |.|...::.||::.|....||:|.:||||||||... .|...:.||||..||.||...||..:
  Rat   450 LFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRSVSKRGVSCQFGPDVTKAFLEEN 513

  Fly   370 ELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAK 434
            :||.|.|:|:|..:|||.....:.||:|||||||.:..|                       ||.
  Rat   514 QLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGN-----------------------KAS 555

  Fly   435 YLYSGMNSSRPTTPQRSA-------PMLATN 458
            |::...:..||...|.:|       ||...|
  Rat   556 YIHLQGSDLRPQFHQFTAVPHPNVKPMAYAN 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359 105/252 (42%)
PP2Ac 160..430 CDD:197547 105/254 (41%)
Ppp5cXP_006228527.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.