DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flw and ppp4cb

DIOPT Version :9

Sequence 1:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_001104638.1 Gene:ppp4cb / 562705 ZFINID:ZDB-GENE-080219-32 Length:307 Species:Danio rerio


Alignment Length:298 Identity:135/298 - (45%)
Similarity:199/298 - (66%) Gaps:11/298 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 VRSCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPP 213
            :|.|...|     |.||:.||.|:|||.:::..:..:::|:.:|||||||:.||..||..||..|
Zfish    14 LRRCELIK-----ENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVP 73

  Fly   214 AANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVK 277
            ..||||:||:||||..|:||..||||.|::||:...|:|||||...|.::|||||||.|:| :|.
Zfish    74 ETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVT 138

  Fly   278 LWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKD 342
            :|:..|:.|:.|.::||||.||||.||||||.:|.::|||.:.|..:||..|.:||||||||: |
Zfish   139 VWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-D 202

  Fly   343 VQGWGENDRGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFD 407
            ..|||.:.||..:.||.|||::|...:::|:||||||:|.:||::.....::|::||||||....
Zfish   203 TTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCG 267

  Fly   408 NAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRP 445
            |...::.:|:.|...|.|.:.:.::.:    |:.|.:|
Zfish   268 NVAAILELDEHLQKEFIIFEAAPQETR----GIPSKKP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359 132/279 (47%)
PP2Ac 160..430 CDD:197547 129/270 (48%)
ppp4cbNP_001104638.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 132/281 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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