DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flw and ppef1

DIOPT Version :9

Sequence 1:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:486 Identity:123/486 - (25%)
Similarity:183/486 - (37%) Gaps:172/486 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GAGPG-SSH---DPLDDLTEQQRRLLQQYSISPPS---------------ETMISADGDQITVHH 128
            |.||. .||   ..:|.|||:.|:|..:..:.|.|               ..::||..::.|:| 
Zfish    89 GNGPDLISHLLDSVVDPLTEEVRQLKYEQIMVPESYSGPRLSFPLSVTDTNALLSAFKEEQTLH- 152

  Fly   129 PREEPKKSRLKLRDFFVAEFVRSCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEA----PL 189
                                      ||.|..       |..::::...|.|.::.|..    .:
Zfish   153 --------------------------GKYVLQ-------LLYETKKFLKQMPNVIYLSTSYAKEI 184

  Fly   190 IICGDIHGQYTDLLRLFEYGGFPPAAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 253
            .||||:||:..|||.:|...|.|.|.| |:|.||:|||||:|.|.|.:|.|:.:.||::..|.||
Zfish   185 TICGDLHGRLDDLLLIFYKNGLPSAENPYIFNGDFVDRGKKSTEIIIILFAFVLLYPDHMHLNRG 249

  Fly   254 NHECASINRIYGFYDECKRRYNV---KLWKTFTDCFNCLPVAAIIDEKIFCCHGGLS--PDLQGM 313
            |||...:|..|||..|..::|..   ::.:...|.|:.||||.:||.|:...|||:|  .||..:
Zfish   250 NHEDHIMNLRYGFTREVMQKYKTHGREILQLLQDVFSLLPVATVIDNKVLIVHGGISDKTDLDFL 314

  Fly   314 EQIRR------------------------------------------------------------ 318
            ..:.|                                                            
Zfish   315 STVERHKVKSALRLPKRSTDHLTVRSCSRSSSRNRGRNSRSSSRHSSRSRRKKLSKQGSRSSSSS 379

  Fly   319 ----------------------------------------LMRPTDVPDTGL----LCDLLWSDP 339
                                                    .:.|.::|...|    :.|:|||||
Zfish   380 SSSSSSSSMCSPRVSAKNTPRRPPPSPTDMLQVPFLDSFVSLEPPELPREELEWQQVVDILWSDP 444

  Fly   340 DKDVQGWGEND-RGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYC 403
             |...|...|. ||....||.||....|.:|.|.|:.|:|:..::|||.....|::|:|||.||.
Zfish   445 -KHQNGCSPNSFRGGGCYFGPDVTQTLLQKHGLCLLIRSHECKQEGYELCHNGQVITIFSASNYY 508

  Fly   404 GEFDNAGGMMTVDDTLMCSF---QILKPSEK 431
            .|..|.|..:.:...|:..|   |:.:.:.|
Zfish   509 EEGSNRGAYVKLGPELVPRFFQYQVSRSTRK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359 105/396 (27%)
PP2Ac 160..430 CDD:197547 102/387 (26%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 108/434 (25%)
EFh_PEF 567..715 CDD:330173
EF-hand motif 567..600 CDD:320054
EF-hand motif 609..649 CDD:320054
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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