DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flw and HCFC1

DIOPT Version :9

Sequence 1:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster
Sequence 2:XP_006724878.1 Gene:HCFC1 / 3054 HGNCID:4839 Length:2080 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359
PP2Ac 160..430 CDD:197547
HCFC1XP_006724878.1 PLN02153 12..330 CDD:177814
Kelch_1 32..69 CDD:279660
KELCH repeat 33..80 CDD:276965
KELCH repeat 84..134 CDD:276965
Kelch_3 91..145 CDD:290151
Kelch_5 134..179 CDD:290565
KELCH repeat 137..196 CDD:276965
KELCH repeat 200..253 CDD:276965
Kelch_3 215..263 CDD:290151
KELCH repeat 255..319 CDD:276965
Kelch_3 264..330 CDD:290151
Kelch_5 319..>351 CDD:290565
KELCH repeat 322..367 CDD:276965
FN3 <1901..1930 CDD:238020
FN3 1936..2041 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.