DRSC/TRiP Functional Genomics Resources

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Protein Alignment flw and gsp-4

DIOPT Version :9

Sequence 1:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_001379823.1 Gene:gsp-4 / 171960 WormBaseID:WBGene00020187 Length:305 Species:Caenorhabditis elegans


Alignment Length:276 Identity:154/276 - (55%)
Similarity:212/276 - (76%) Gaps:1/276 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 MTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYV 224
            :.|.|::..|..::.:|..|..|||:|.|:|:||||||||:||||:|:..||||..|:|||||||
 Worm    28 VNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDINFLFLGDYV 92

  Fly   225 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVKLWKTFTDCFNC 288
            |||:|::|||||:..:|||||||||:|||||||.:|||:||||:||.||| :.:||..|.|.||.
 Worm    93 DRGRQNIETICLMFCFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIFQDTFNW 157

  Fly   289 LPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGV 353
            :|:..:|..:|.|.||||||.||.::|:|:|.||.|.|:..:..||||:|||:.|:||..|.|||
 Worm   158 MPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADPDQWVKGWQANTRGV 222

  Fly   354 SFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDNAGGMMTVDDT 418
            |:.||.|||:...:|.::||:.||||||:|||||||.:::||:||||:|||:|||:...|.||:.
 Worm   223 SYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKKMVTIFSAPHYCGQFDNSAATMKVDEN 287

  Fly   419 LMCSFQILKPSEKKAK 434
            ::|:|.:.||:.|..:
 Worm   288 MVCTFVMYKPTPKSLR 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359 151/268 (56%)
PP2Ac 160..430 CDD:197547 153/270 (57%)
gsp-4NP_001379823.1 MPP_superfamily 6..297 CDD:417454 151/268 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S19
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.780

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