| Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002934223.1 | Gene: | vldlr / 733485 | XenbaseID: | XB-GENE-971958 | Length: | 868 | Species: | Xenopus tropicalis |
| Alignment Length: | 432 | Identity: | 130/432 - (30%) |
|---|---|---|---|
| Similarity: | 202/432 - (46%) | Gaps: | 74/432 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 335 ELIDTPKAPNSVR-AWDPSLQPYED---NPCAHNNGNCSHLC--LLATNSQGFSCACPTGVKLIS 393
Fly 394 ANTC-----------------------------------------ANGSQEMMFIVQRTQISKIS 417
Fly 418 LDSPDYTIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHAD-----GTGVTDFVTSEVR 477
Fly 478 HPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNER 542
Fly 543 KPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISDN- 606
Fly 607 -LKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLKV-TRLREVRGQNAC- 668
Fly 669 -AVRNGGCSHLCLNRPR------DYVCRCAIDYELANDKRTC 703 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| arr | NP_524737.2 | LY | 162..201 | CDD:214531 | |
| NHL | 168..503 | CDD:302697 | 59/219 (27%) | ||
| NHL repeat | 172..237 | CDD:271320 | |||
| LY | 252..293 | CDD:214531 | |||
| NHL repeat | 261..298 | CDD:271320 | |||
| NHL repeat | 303..339 | CDD:271320 | 2/3 (67%) | ||
| NHL repeat | 341..419 | CDD:271320 | 30/124 (24%) | ||
| NHL repeat | 428..476 | CDD:271320 | 13/52 (25%) | ||
| LY | 472..511 | CDD:214531 | 15/38 (39%) | ||
| NHL repeat | 477..503 | CDD:271320 | 10/25 (40%) | ||
| Ldl_recept_b | 534..573 | CDD:278487 | 15/38 (39%) | ||
| LY | 558..599 | CDD:214531 | 11/40 (28%) | ||
| LY | 600..641 | CDD:214531 | 14/42 (33%) | ||
| FXa_inhibition | 668..703 | CDD:291342 | 16/42 (38%) | ||
| LY | 739..773 | CDD:214531 | |||
| LY | 776..818 | CDD:214531 | |||
| LY | 819..860 | CDD:214531 | |||
| FXa_inhibition | 973..1010 | CDD:291342 | |||
| LY | 1122..1164 | CDD:214531 | |||
| FXa_inhibition | 1273..1313 | CDD:291342 | |||
| LDLa | 1319..1362 | CDD:238060 | |||
| LDLa | 1365..1399 | CDD:238060 | |||
| LDLa | 1399..1433 | CDD:197566 | |||
| vldlr | XP_002934223.1 | LDLa | 31..65 | CDD:238060 | |
| Ldl_recept_a | 68..101 | CDD:365841 | |||
| Ldl_recept_a | 109..147 | CDD:365841 | |||
| Ldl_recept_a | 151..186 | CDD:365841 | |||
| LDLa | 190..222 | CDD:197566 | |||
| Ldl_recept_a | 236..271 | CDD:365841 | |||
| Ldl_recept_a | 274..310 | CDD:365841 | |||
| LDLa | 316..348 | CDD:197566 | 7/19 (37%) | ||
| FXa_inhibition | 358..392 | CDD:373209 | 17/37 (46%) | ||
| EGF_CA | 394..424 | CDD:214542 | 0/29 (0%) | ||
| LY | 505..547 | CDD:214531 | 15/43 (35%) | ||
| LY | 548..591 | CDD:214531 | 18/43 (42%) | ||
| LY | 592..634 | CDD:214531 | 11/41 (27%) | ||
| Ldl_recept_b | 655..694 | CDD:393440 | 9/38 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||