Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001181916.1 | Gene: | lrp2a / 568184 | ZFINID: | ZDB-GENE-050119-2 | Length: | 4673 | Species: | Danio rerio |
Alignment Length: | 1865 | Identity: | 513/1865 - (27%) |
---|---|---|---|
Similarity: | 784/1865 - (42%) | Gaps: | 359/1865 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LCQVIDNNEDVTTKATK-------------CTKSNSGV--GWRQMLIGFLLIC---FGISNSWQ- 61
Fly 62 ---YKNVHMPSSSSLIASPPASAF--------------------VNTPATLLFTTRHDIQVANI- 102
Fly 103 TRPTGGPQIDVIVRDLAEAMAIDFYYAKNLVCWTDSGREIIECAQTNSSALQPLLRAPKQTVIST 167
Fly 168 GLDKPEGLAMDWYTDKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQPRAVAVVPARK--LLIWT 230
Fly 231 DWGEYPKIERASMDGDPLSRMTLVKEHVFWPNGLAVDLKNELIYWTDGKHHFIDVMRLDGSSRRT 295
Fly 296 IVNN---LKYPFSLTFYDDRLYWTD-----------WQRGSLNALDLQTRELKELIDTPKAPNSV 346
Fly 347 RAWDPSLQPYEDNPCAHNNGNCSHLCLL-ATNSQGFSCACPTGVKLISAN-TCANGSQEMMFIVQ 409
Fly 410 RTQISKISLDSPDYTIFPL-PLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGVTDFVT 473
Fly 474 SEV-RHPDGLALDWLARNLYWTDTVTDRIEVCRLDGTA--RKVLIYEH-----LEEPRAIAVAPS 530
Fly 531 LGWMFWSDWNERK---PKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVA 592
Fly 593 NMDGSGRRVVISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLKVT 657
Fly 658 RLREVRG-QNACAVRNGGCSHLCLNRPRD-YVCRCAIDYELANDKRTCVVPAAFLLFSRQEHIGR 720
Fly 721 ISIEYNEG-NHNDERIPFKD-VRDAHALDVSVAERRIYWTDQKSKC-----IFRAFLNGSYVQRI 778
Fly 779 VDSGL--IGPDGIAVDWLANNIYWSDA--EARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPRRG 839
Fly 840 YMYWTE-SPTDSIRRAAMDGSDLQTIV-AGANHAAGLTFDQETRRLYWATQSRPAKIESADWDGK 902
Fly 903 KRQILVGSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTG--QNRSLVHSGMTYITSLLVFNDK 965
Fly 966 RQTGV------NPCKVNNGGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPR-NYIIFSQRN 1023
Fly 1024 CFGRLLPNTTDCPNIPLPVSG--KNIRAVDYDPITHHIYWIE----GRSHSIKRSLANGTK--VS 1080
Fly 1081 LLANSGQPFDLAIDIIGRLLFWTCSQSNSINVTSFLGESVGVIDTGDSEKPRNIAVHAMKRLLFW 1145
Fly 1146 TDVGSHQAIIRARVDGNERVELA-YKLEGVTALALDQQSDMIYYAHG--KRIDAIDINGKNKKTL 1207
Fly 1208 VSMHISQVINIAALGGFVYWLDDKT-GVERITV-NGERRSAELQRLPQITDIRAVWTP-DPKVLR 1269
Fly 1270 N-------HTCMHSRTKCSHICIASGEGIARTRDVCSCP----------KHLM------------ 1305
Fly 1306 ------------LLEDKENCG-----------------------------AFPACGPDHFTCAAP 1329
Fly 1330 VSGISDVNKDCIPASWRCDGQKDCPDKSDEVGC---PTCRADQFSCQSGECIDKSLVCDGTTNC- 1390
Fly 1391 ANG-HDEADCCKR---PGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDKRA 1451
Fly 1452 FMILIGATMITIFSIVYLLQFC---RTRIGKSRTEPK----------DDQATDPLSPSTL----- 1498
Fly 1499 SKSQRVSKIASVADAVRMSTLNSRNSMNSYDRNHITGASSSTTNGSSMVAYPINPPPSPATRSRR 1563
Fly 1564 PYRHYKIINQPPPPTPCSTD--ICD---------ESDSNYTSKSNSNNS---NGGATKHSSSSAA 1614
Fly 1615 ACLQYGYDSEPYPPPPTPRSHYHSDVRIVPESSCPPSPSSRSSTY 1659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 14/38 (37%) |
NHL | 168..503 | CDD:302697 | 120/354 (34%) | ||
NHL repeat | 172..237 | CDD:271320 | 27/66 (41%) | ||
LY | 252..293 | CDD:214531 | 16/40 (40%) | ||
NHL repeat | 261..298 | CDD:271320 | 15/36 (42%) | ||
NHL repeat | 303..339 | CDD:271320 | 9/46 (20%) | ||
NHL repeat | 341..419 | CDD:271320 | 27/79 (34%) | ||
NHL repeat | 428..476 | CDD:271320 | 14/48 (29%) | ||
LY | 472..511 | CDD:214531 | 16/41 (39%) | ||
NHL repeat | 477..503 | CDD:271320 | 11/25 (44%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 13/41 (32%) | ||
LY | 558..599 | CDD:214531 | 14/40 (35%) | ||
LY | 600..641 | CDD:214531 | 14/40 (35%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 14/35 (40%) | ||
LY | 739..773 | CDD:214531 | 12/39 (31%) | ||
LY | 776..818 | CDD:214531 | 20/45 (44%) | ||
LY | 819..860 | CDD:214531 | 17/41 (41%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 14/36 (39%) | ||
LY | 1122..1164 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 12/73 (16%) | ||
LDLa | 1319..1362 | CDD:238060 | 17/42 (40%) | ||
LDLa | 1365..1399 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1399..1433 | CDD:197566 | 12/36 (33%) | ||
lrp2a | NP_001181916.1 | LDLa | 23..57 | CDD:238060 | |
Ldl_recept_a | 61..96 | CDD:278486 | |||
LDLa | 103..137 | CDD:238060 | |||
LDLa | 143..174 | CDD:238060 | |||
LDLa | 178..212 | CDD:238060 | |||
LDLa | 217..251 | CDD:238060 | |||
LDLa | 258..292 | CDD:238060 | |||
NHL | <429..610 | CDD:302697 | |||
NHL repeat | 461..496 | CDD:271320 | |||
LY | 495..540 | CDD:214531 | |||
LY | 543..583 | CDD:214531 | |||
NHL repeat | 550..591 | CDD:271320 | |||
FXa_inhibition | 655..696 | CDD:291342 | |||
LY | 768..804 | CDD:214531 | |||
Ldl_recept_b | 830..870 | CDD:278487 | |||
LY | 854..896 | CDD:214531 | |||
FXa_inhibition | 973..1005 | CDD:291342 | |||
LDLa | 1018..1052 | CDD:238060 | |||
LDLa | 1059..1093 | CDD:238060 | |||
LDLa | 1101..1135 | CDD:238060 | |||
LDLa | 1141..1175 | CDD:238060 | |||
LDLa | 1179..1214 | CDD:238060 | |||
LDLa | 1222..1255 | CDD:197566 | |||
LDLa | 1264..1298 | CDD:238060 | |||
LDLa | 1304..1337 | CDD:197566 | 6/15 (40%) | ||
FXa_inhibition | 1351..1386 | CDD:291342 | 10/34 (29%) | ||
EGF_CA | 1388..1418 | CDD:214542 | 4/29 (14%) | ||
LY | 1459..1498 | CDD:214531 | 11/46 (24%) | ||
LY | 1500..1541 | CDD:214531 | 16/40 (40%) | ||
LY | 1543..1585 | CDD:214531 | 20/41 (49%) | ||
LY | 1589..1630 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 1709..1740 | CDD:291342 | 13/30 (43%) | ||
NHL | <1799..1978 | CDD:302697 | 64/179 (36%) | ||
NHL repeat | 1823..1866 | CDD:271320 | 20/42 (48%) | ||
NHL repeat | 1872..1913 | CDD:271320 | 15/40 (38%) | ||
Ldl_recept_b | 1883..1927 | CDD:278487 | 14/43 (33%) | ||
LY | 1912..1953 | CDD:214531 | 14/41 (34%) | ||
NHL repeat | 1920..1946 | CDD:271320 | 8/25 (32%) | ||
FXa_inhibition | 2022..2058 | CDD:291342 | 14/35 (40%) | ||
NHL | <2125..2295 | CDD:302697 | 57/169 (34%) | ||
NHL repeat | 2149..2186 | CDD:271320 | 19/36 (53%) | ||
LY | 2182..2225 | CDD:214531 | 18/42 (43%) | ||
NHL repeat | 2189..2226 | CDD:271320 | 14/36 (39%) | ||
LY | 2228..2267 | CDD:214531 | 8/38 (21%) | ||
NHL repeat | 2235..2276 | CDD:271320 | 8/40 (20%) | ||
FXa_inhibition | 2346..2382 | CDD:291342 | 14/36 (39%) | ||
LY | 2461..2500 | CDD:214531 | 8/38 (21%) | ||
Ldl_recept_b | 2519..2559 | CDD:278487 | 13/39 (33%) | ||
LY | 2545..2585 | CDD:214531 | 8/39 (21%) | ||
Ldl_recept_b | 2603..2642 | CDD:278487 | 12/46 (26%) | ||
FXa_inhibition | 2655..2691 | CDD:291342 | 11/40 (28%) | ||
LDLa | 2759..2793 | CDD:238060 | 17/42 (40%) | ||
LDLa | 2798..2835 | CDD:238060 | 14/36 (39%) | ||
LDLa | 2838..2872 | CDD:294076 | 11/33 (33%) | ||
LDLa | 2882..2913 | CDD:238060 | 5/30 (17%) | ||
LDLa | 2923..2955 | CDD:197566 | 5/31 (16%) | ||
LDLa | 2965..3002 | CDD:197566 | 7/58 (12%) | ||
LDLa | 3011..3045 | CDD:238060 | 12/62 (19%) | ||
LDLa | 3050..3083 | CDD:238060 | |||
LDLa | 3093..3127 | CDD:238060 | |||
cEGF | 3150..3173 | CDD:289433 | |||
vWFA | <3165..3206 | CDD:294047 | |||
LY | 3237..3279 | CDD:214531 | |||
LY | 3282..3321 | CDD:214531 | |||
Ldl_recept_b | 3350..3390 | CDD:278487 | |||
LY | 3376..3416 | CDD:214531 | |||
LY | 3417..3458 | CDD:214531 | |||
FXa_inhibition | 3486..>3514 | CDD:291342 | |||
LDLa | 3529..3561 | CDD:238060 | |||
LDLa | 3570..3602 | CDD:238060 | |||
LDLa | 3611..3643 | CDD:238060 | |||
LDLa | 3651..3683 | CDD:197566 | |||
LDLa | 3699..3731 | CDD:238060 | |||
LDLa | 3738..3771 | CDD:238060 | |||
LDLa | 3776..3810 | CDD:238060 | |||
LDLa | 3815..3849 | CDD:238060 | |||
LDLa | 3859..3891 | CDD:238060 | |||
LDLa | 3902..3932 | CDD:197566 | |||
LDLa | 3945..3979 | CDD:238060 | |||
EGF_CA | 4024..4055 | CDD:214542 | |||
LY | 4158..4193 | CDD:214531 | |||
Ldl_recept_b | 4214..4254 | CDD:278487 | |||
LY | 4238..4281 | CDD:214531 | |||
FXa_inhibition | 4356..>4377 | CDD:291342 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590466 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |