Sequence 1: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325646.1 | Gene: | lrp1ab / 565797 | ZFINID: | ZDB-GENE-030131-7126 | Length: | 4562 | Species: | Danio rerio |
Alignment Length: | 1578 | Identity: | 463/1578 - (29%) |
---|---|---|---|
Similarity: | 741/1578 - (46%) | Gaps: | 230/1578 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 PSSSSLIASPPASAFVNTPATLLFTTRHDIQVANITRPTGGPQIDVIVRDLAEAMAIDFYYAKNL 132
Fly 133 VCWTDSGRE-IIECAQTNSSALQPLLRAPKQTVISTGLDKPEGLAMDWYTDKIYWTDGEKNRIEV 196
Fly 197 ATLDGRYQKVLFWTDLDQPRAVAVVPARKLLIWTDW-GEYPKIERASMDGDPLSRMTLVKEHVF- 259
Fly 260 -WPNGLAVDLKNELIYWTDGKHHFIDVMRLDGSSRRTIV---NNLKYPFSLTFYDDRLYWTDWQR 320
Fly 321 GSLNALDLQTRELKELID-TPKAPNSVRAWDPSLQPYEDNPCAHNNGN--CSHLCLLATNSQGFS 382
Fly 383 CACPTGVKL-ISANTCANGSQEMMFIVQRTQISKISLDSPDYT-IFPLPLGKVKYAIAIDYDPVE 445
Fly 446 EHIYWSDVETYTIKRAHADGTGVTDFVTSEVRHPDGLALDWLARNLYWT--DTVTDRIEVCRLDG 508
Fly 509 TARKVLIY-EHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDGSERVVLVSENLGWPNGIAL 572
Fly 573 DIEAKAIYWCDGKTDKIEVANMDGSGRRVV--ISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHK 635
Fly 636 ITGNNRIVVVDQYPDLMGLKV--TRLREVRGQNACAVRNGGCSHLCL-NRPRDYVCRCAIDYELA 697
Fly 698 NDKRTCVVPAAFLLFSRQEHIGRISIEYNEGNHNDERIPFKDVRDAHALDVSVAERRIYWTDQKS 762
Fly 763 KCIFRAFLNGSYVQRIVDSGLIGPDGIAVDWLANNIYWSDAEARRIEVARLDGSSRRVLLWKGVE 827
Fly 828 EPRSLVLEPRRGYMYWTE-SPTDSIRRAAMDGSDLQTIV-AGANHAAGLTFDQETRRLYWATQSR 890
Fly 891 PAKIESADWD-GKKRQILVGSDMDEPYAVSLYQDYVYWSDWN--TGDIERVHKTTGQNRSLVHSG 952
Fly 953 M-TYITSLLVFNDKRQTGVNPCKVNNGGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPRNY 1016
Fly 1017 IIFSQRNCFGRLLPNTTDCPNIPLPVSG-------KNIRAVDYD------PITHHIYWIEGRSHS 1068
Fly 1069 IKRSLANGT-KVSLLANSGQPFDLAIDIIGRLLFWTCSQSNSINVTSFLGESVGVID-------T 1125
Fly 1126 GDSEKPRNIAVHAMKRLLFWTDVGSHQ-AIIRARVDG-NERVELAYKLEGVTALALDQQSDMIYY 1188
Fly 1189 AHG--KRIDAIDINGKNKKTLVSMHISQVINIAALGGFVYWLD---------DKTGVER------ 1236
Fly 1237 --------ITVNGERRSAEL----------QRLPQITD---IRAVWTPDPKVLRNHTCMHSRTKC 1280
Fly 1281 SHI---------CI---ASGEGIARTRD------------VCS----------CPKHLMLLEDKE 1311
Fly 1312 NCG----AFPA----CGPDHFTC--------------------------AAP----------VSG 1332
Fly 1333 IS----DVNKDCIPASWRCDGQKDCPDKSDEVGCP-----TCRADQFSCQSGECIDKSLVCDGTT 1388
Fly 1389 NCANGHDEADCCK-----RPGEFQCPINKLCISAALLCDGWENCADGADE--------------- 1433
Fly 1434 --SSDICLQRRMAPATDK 1449 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 19/38 (50%) |
NHL | 168..503 | CDD:302697 | 137/347 (39%) | ||
NHL repeat | 172..237 | CDD:271320 | 28/65 (43%) | ||
LY | 252..293 | CDD:214531 | 17/42 (40%) | ||
NHL repeat | 261..298 | CDD:271320 | 13/39 (33%) | ||
NHL repeat | 303..339 | CDD:271320 | 11/36 (31%) | ||
NHL repeat | 341..419 | CDD:271320 | 31/80 (39%) | ||
NHL repeat | 428..476 | CDD:271320 | 21/47 (45%) | ||
LY | 472..511 | CDD:214531 | 19/40 (48%) | ||
NHL repeat | 477..503 | CDD:271320 | 13/27 (48%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 9/38 (24%) | ||
LY | 558..599 | CDD:214531 | 12/40 (30%) | ||
LY | 600..641 | CDD:214531 | 11/42 (26%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 13/35 (37%) | ||
LY | 739..773 | CDD:214531 | 9/33 (27%) | ||
LY | 776..818 | CDD:214531 | 22/41 (54%) | ||
LY | 819..860 | CDD:214531 | 14/41 (34%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 21/36 (58%) | ||
LY | 1122..1164 | CDD:214531 | 14/50 (28%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 11/73 (15%) | ||
LDLa | 1319..1362 | CDD:238060 | 19/82 (23%) | ||
LDLa | 1365..1399 | CDD:238060 | 15/33 (45%) | ||
LDLa | 1399..1433 | CDD:197566 | 13/38 (34%) | ||
lrp1ab | XP_021325646.1 | LDLa | 36..69 | CDD:197566 | |
LDLa | 81..114 | CDD:197566 | |||
FXa_inhibition | 170..198 | CDD:317114 | |||
NHL | <292..479 | CDD:302697 | |||
NHL repeat | 292..325 | CDD:271320 | |||
LY | 323..365 | CDD:214531 | |||
NHL repeat | 332..368 | CDD:271320 | |||
LY | 368..408 | CDD:214531 | |||
NHL repeat | 373..413 | CDD:271320 | |||
NHL repeat | 421..467 | CDD:271320 | |||
FXa_inhibition | 494..526 | CDD:317114 | |||
LY | 558..600 | CDD:214531 | |||
LY | 602..640 | CDD:214531 | |||
LY | 647..695 | CDD:214531 | |||
LY | <707..740 | CDD:214531 | |||
FXa_inhibition | 811..846 | CDD:317114 | |||
LDLa | 857..889 | CDD:197566 | |||
LDLa | 899..932 | CDD:238060 | |||
LDLa | 940..971 | CDD:238060 | |||
LDLa | 982..1015 | CDD:238060 | |||
LDLa | 1019..1052 | CDD:238060 | |||
LDLa | 1066..1101 | CDD:238060 | |||
LDLa | 1110..1144 | CDD:238060 | |||
LDLa | 1149..1185 | CDD:238060 | |||
FXa_inhibition | 1188..1224 | CDD:317114 | |||
LY | 1339..1381 | CDD:214531 | 21/41 (51%) | ||
LY | 1383..1426 | CDD:214531 | 18/44 (41%) | ||
LY | 1437..1470 | CDD:214531 | 13/32 (41%) | ||
LY | 1479..1515 | CDD:214531 | 12/35 (34%) | ||
LY | 1616..1652 | CDD:214531 | 18/35 (51%) | ||
LY | 1653..1696 | CDD:214531 | 19/42 (45%) | ||
LY | 1700..1739 | CDD:214531 | 11/42 (26%) | ||
LY | 1739..1780 | CDD:214531 | 11/41 (27%) | ||
FXa_inhibition | 1853..1889 | CDD:317114 | 13/35 (37%) | ||
LY | 1919..1959 | CDD:214531 | 10/39 (26%) | ||
LY | 1962..2002 | CDD:214531 | 22/39 (56%) | ||
LY | 2003..2046 | CDD:214531 | 15/42 (36%) | ||
LY | 2048..2090 | CDD:214531 | 11/42 (26%) | ||
FXa_inhibition | 2162..2197 | CDD:317114 | 21/36 (58%) | ||
SGL | 2236..2464 | CDD:331563 | 44/228 (19%) | ||
Ldl_recept_b | 2346..2387 | CDD:278487 | 12/40 (30%) | ||
LY | 2372..2413 | CDD:214531 | 7/40 (18%) | ||
FXa_inhibition | 2483..2518 | CDD:317114 | 6/34 (18%) | ||
LDLa | 2523..2559 | CDD:294076 | 6/35 (17%) | ||
LDLa | 2567..2601 | CDD:238060 | 6/33 (18%) | ||
LDLa | 2606..2640 | CDD:238060 | 3/33 (9%) | ||
LDLa | <2667..2689 | CDD:238060 | 13/21 (62%) | ||
LDLa | 2697..2731 | CDD:238060 | 15/33 (45%) | ||
LDLa | 2738..2769 | CDD:197566 | 11/31 (35%) | ||
LDLa | 2777..2810 | CDD:197566 | 5/26 (19%) | ||
LDLa | 2821..2853 | CDD:197566 | |||
Ldl_recept_a | 2861..2895 | CDD:278486 | |||
LDLa | 2908..2942 | CDD:238060 | |||
cEGF | 2965..2988 | CDD:315355 | |||
EGF_CA | 2985..3019 | CDD:214542 | |||
LY | 3052..3096 | CDD:214531 | |||
LY | 3097..3139 | CDD:214531 | |||
LY | 3141..3183 | CDD:214531 | |||
LY | 3184..3226 | CDD:214531 | |||
LY | 3227..3267 | CDD:214531 | |||
FXa_inhibition | 3297..3333 | CDD:317114 | |||
LDLa | 3337..3368 | CDD:238060 | |||
LDLa | 3377..3411 | CDD:238060 | |||
LDLa | 3416..3451 | CDD:238060 | |||
LDLa | 3455..3488 | CDD:197566 | |||
LDLa | 3496..3529 | CDD:197566 | |||
LDLa | 3539..3573 | CDD:238060 | |||
LDLa | 3578..3612 | CDD:238060 | |||
LDLa | 3616..3650 | CDD:238060 | |||
LDLa | 3658..3690 | CDD:238060 | |||
LDLa | 3699..3735 | CDD:238060 | |||
LDLa | 3741..3776 | CDD:238060 | |||
EGF_CA | 3825..3855 | CDD:214542 | |||
LY | 3963..3999 | CDD:214531 | |||
Ldl_recept_b | 4020..4060 | CDD:278487 | |||
LY | 4044..4085 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590468 | |
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7812 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.640 |